Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq333 499 3e-136 seq1891 257 2e-63 >seq333 Length=169781 Score = 499 bits (552), Expect = 3e-136 Identities = 1464/2242 (65%), Gaps = 79/2242 (4%) Strand=Plus/Plus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| |||||||||||| || || || || || |||||||||||||||||||||| Sbjct 49451 GTTCTTAAATAATACATCCCGGTTTTCAATCCCTTCTTCCATCCATAGAAATGCATACTG 49510 Query 47073 GTTAATTTAGAATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATA 47132 ||||||||| | || || ||| || ||||| | |||||| |||||||| Sbjct 49511 GTTAATTTACCCATGGTTGGATCCTTAATGTGGATATTTAAAGATTGTGATTGATCAATG 49570 Query 47133 AATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTT 47192 || ||| |||||| || |||||||| | |||| |||| | || ||||| || || Sbjct 49571 AAGGCAGATCTATCGGCCGCCATATCAACAATATGTTTTTGAGAAATTTCCCACACGGTC 49630 Query 47193 TTATAAATTTGTTTAATGTCTTCTGGGAGATTAG-TATT--TTGAATAGATCCTCCgttt 47249 || || | || ||||| || || |||| ||||| || | ||||||||| || || Sbjct 49631 TTGTATAATTCCTTAATTTCATCAGGGACATTAGGTAATGATTGAATAGAACCATTATTG 49690 Query 47250 tctataattttgtttttta---attcatttgaccaaagttttcgttcagttaatgttttt 47306 | ||||| | | || | ||||||| ||||| | | ||| ||| | || Sbjct 49691 GCAATAATGCTACTCTTCATGGATTCATT---CCAAATTCCTAAATCAACTAAATCTCTT 49747 Query 47307 aaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTA 47366 || | || |||||||||||||| ||||| |||| || |||| | ||| || || Sbjct 49748 AATAAATATGGATTAACAATTTGGAATTCACCAGCTAAAACTCGTCTAGAATAAATGTTG 49807 Query 47367 CTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGC 47426 ||||||||||| | | |||||||||| || || ||||| | ||||| || |||||| Sbjct 49808 GAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTGTGATGTTGACGCCGTAGGC 49867 Query 47427 ATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGT 47486 || | ||||| ||||| ||||||| |||| ||| || | Sbjct 49868 ATTGGAGCAACCAATAATGAGTTTCTTAAACCATGTTTGGCCATTTTTTGCTTCAAACTA 49927 Query 47487 TTCCAATCCCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTA 47546 | ||||||||| | || | || | ||| |||||| |||| | | ||||| | Sbjct 49928 TCCCAATCCCATAATTCAGTAGGTTTTCTTTCCCATAAATCAAATTGCAATAATCCTTGA 49987 Query 47547 CTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTT 47606 || || || | || ||| ||| | || | | || ||| | |||| Sbjct 49988 GAAGCAGGTGATCCTTCGTAAGTTGGATATGCGCCTTCTTCTTGAGCTAATTCAACCGAG 50047 Query 47607 GCTTCCAATGCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCT 47666 | ||| | ||| || ||| || ||||| || |||| || |||| | || |||||| Sbjct 50048 GATTCAACAGCAGCATGATAAATGGTTTCGAAAATTTGAATATTTAATTCCCGAGCTTCT 50107 Query 47667 GATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATA 47726 || ||||| || | |||| ||| || || || || ||||| | Sbjct 50108 TGAGAATCAAATGGTAATCTTAAACTCATAAATGCATCAGCTAAACCCTGGACACCCAAG 50167 Query 47727 CCAATTGGTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATA 47786 | | ||||||| | |||| ||| || ||||| || | |||||| | ||| | Sbjct 50168 GCCACGGGTCTATTTCTCATATTTGAATTCTTGGCTTCAGGAACTGGATAATAGTTACGA 50227 Query 47787 TCTATAATTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAA 47846 || |||| | ||||| | | || |||||| | |||| Sbjct 50228 TCAATAACTCGATTTAAATTACGAGTAACTACTTTAGTCACCTCATGTAATTTTTCAAAA 50287 Query 47847 T-----CAAACTTGTTATTTATAA-----CA-AACCTATTAAGTG-CTATAGATGCTAGA 47894 | ||| || | || || | || | || | || | ||||| |||| | Sbjct 50288 TTATACCAAGAATGATTTTCATCAGTTTCCACGAATGATGGAATGGCAATAGAAGCTAAA 50347 Query 47895 TTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCA 47954 ||||| || || || |||| ||| || ||||| | |||||| ||||| |||| | Sbjct 50348 TTACACACGGCAACTTCATCAGGAGCAGAATATTCCACAATTTCACAACATAAATTAGAA 50407 Query 47955 CATTTGATAGTACCCAAATTTTGATGATT--ATTNNNNTTGTTACATGCGTCCTTGTAAA 48012 |||| ||| || ||||| | ||||| ||| |||||||| || ||||| || | Sbjct 50408 GATTTAATAACCCCTAAATTCTTTTGATTGGATT--TTTTGTTACAAGCATCCTTATATA 50465 Query 48013 GCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAG 48072 |||||| || || || ||||| | |||| ||| | |||||| | ||| | | || Sbjct 50466 ACATAAATGGAGTACCTGTTTCAGTTTGAGCTTCCAAGATAGAATACCATAATTTTTGAG 50525 Query 48073 CCTTTATAACAGCTCTAG---CTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAA 48129 |||| || || | ||| | | || ||| ||| | |||||| | |||| Sbjct 50526 CCTTGAT---AGTTTTAGTACCACGACCTTCTCTTTCATATCTTTCATATAATTCTTCAA 50582 Query 48130 ATTCATCCCCATACACATTATCTAACCCAGGACATTCATTAGGACACATCAATGACCAAT 48189 ||||||| ||||| |||| | ||| |||||| |||||| || | | ||| | ||| | Sbjct 50583 ATTCATCACCATAAACATCAGGTAAACCAGGAGCTTCATTTGGTGAAAACAAAGTCCATT 50642 Query 48190 CCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAAT 48249 | ||| | || |||| |||| |||| ||| || ||||| | || ||||||| Sbjct 50643 CTCCATTTTGTTCAACTCGTTTCATGAATAAATCCGGAATCCATAACGCCGGGAATAAAT 50702 Query 48250 CCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAGTTCAAGAAAGTCCATTATAT 48309 | |||| ||| | |||||| || || ||| || ||| |||| || || | |||| Sbjct 50703 CTCTAGCTCTAATTTCTTCCTTACCGGAATTTTTTCTAATATCAATGAAATCAAAAATAT 50762 Query 48310 CAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGAT 48369 | |||||||| ||||||||||| | || | | ||||||| || ||||| ||||||| Sbjct 50763 CCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCTCCTGGTCTCTTGTTACCACCTTGAT 50822 Query 48370 CTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATAC 48429 | | ||| | || || ||||| ||||||| | ||| |||| |||||| || || ||| Sbjct 50823 CAACATAACGAGCCGTGTTGTTGAAAACTCTAACCATGGGGATAATACCGTTGGAAGTAC 50882 Query 48430 CATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAAT-TGAAATACCTATA 48488 ||||||| || | ||||||| ||| | || | |||||| ||| || || || ||| Sbjct 50883 CATTGGTACCAGCAATATAAGAACCAGTGGCCCGGATATTATGAATATGTAA-CCCAATA 50941 Query 48489 CCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATA 48548 ||||| || | || || |||| ||||||| || | || || ||||| || || || Sbjct 50942 CCACCAGCACTCTTGGAAATTAAAGCACACGTCTTTAACGTGTCGTAAATACCATCAATG 51001 Query 48549 CTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAA 48608 ||| || ||||| | | ||||| ||||||||| ||| ||| || | | Sbjct 51002 GAATCTTCCTTCATAGCAACCAAGAAACACGAAGACATTTGTGGACTTGGAGTACCAGCA 51061 Query 48609 TTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCA 48668 || ||||| || || || |||| |||| |||| | || | || ||||||| |||| Sbjct 51062 TTGAATAACGTGGGGGACCCATGGGTAAAGTATTTTTGAGACATTAAATTATATGATTCA 51121 Query 48669 ATAAC----AGAATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATA 48724 || || |||| | | || | ||| ||||| |||| || | ||| | | || Sbjct 51122 ATTACTCGGGGAATATCT-TCAC---CATGAATACCAATAGCAACTCTCATAAGTAAATG 51177 Query 48725 TTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTT 48784 ||||||||||||| ||| ||| ||| | || | ||| ||| ||||||| ||||| Sbjct 51178 TTGAGGTCTTTCAGCAACTTTACCATTAACACGTAACAAATAAGATCTTTCCAAGGTTTT 51237 Query 48785 AAAACCAAAATAGTTGTA--TGAAAAGTCGTTATCATTAATAATTGATGAATTT-ATTC- 48840 ||||||||||||||||| ||||| || ||||| || ||| | ||||||| |||| Sbjct 51238 GAAACCAAAATAGTTGTAACTGAAA--TCACGATCATAAACAATAGTTGAATTTAATTCA 51295 Query 48841 TTTCCTTATGTTTATATACTA-CATCCATTACATT-----TTTTGATATAATTGATTCC- 48893 | | ||| ||| ||| || ||| || | || | | | ||| | ||| Sbjct 51296 TCAGCATATTTTTGAATAATATCATAAGTTTCCTTGGAAATCATAGGAGAATGTAATCCA 51355 Query 48894 -TT-----GTAAAGATCTTC-TACAA--CATCACT---------AAATAttttttttGTT 48935 || || || || ||| ||||| || ||| |||| |||| ||||| Sbjct 51356 GTTTTGGGGTTAATATATTCGTACAACTCAGTACTAACTTGAGAAAATTGTTTTGTTGTT 51415 Query 48936 TCTTTATGAAGATTAGATATAGATATTCTAGCAGCTAATATAGCATAATCTGGATGAATT 48995 | |||||| | |||||| | || |||||||||||||| |||||||||||||||||||| Sbjct 51416 TGTTTATGTAAATTAGAAACAGCAATTCTAGCAGCTAAGATAGCATAATCTGGATGAATA 51475 Query 48996 GTTGTACATGT-ACTAGATATTTCTGCTGCTAATATATCTAATTCTTTAGTAGTTACACC 49054 || || ||| | | || |||| || || || ||||||| || |||| || ||||| Sbjct 51476 GTGGT-CATATAAGCAGCAGTTTCAGCAGCCAAGTTATCTAACTCGATAGTGGTAACACC 51534 Query 49055 TGTATATATTCCTTGAATAACT--TTCATTGCTATATTTACTGGATCTATATGATCCATA 49112 | ||||| || ||||||| || | || || | || || || | |||| | Sbjct 51535 TTGATATACACCGGAAATAACTCGTTGAGTG--ATGGTGACCGGTTCGACGTGATTAGTG 51592 Query 49113 TCCAGTCCATAACATAAtttttttATTCTAGATGTAATTTTATCAAACATTATATTCTCT 49172 || | || ||||||||| ||| | ||||| || ||||||||||| || ||| Sbjct 51593 TCTAACCCGTAACATAATCTTTGCACTCTAGCAGTGATTTTATCAAAACGTACTGGCTCC 51652 Query 49173 TTACGACCGTCACGTTTTATAA 49194 ||||| ||||| | | |||||| Sbjct 51653 TTACGGCCGTCTC-TCTTATAA 51673 Score = 412 bits (456), Expect = 4e-110 Identities = 658/938 (70%), Gaps = 10/938 (1%) Strand=Plus/Plus Query 18645 TTCATTAGAATT---CATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAA 18701 |||||||| || ||| || || | ||||||| |||| |||||| ||||||||||| Sbjct 13636 TTCATTAGTCTTGGCCATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAA 13695 Query 18702 ATTAGTTTTTCCCTCTAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATA 18761 |||||| || || |||| || ||| ||||| |||||||||||||| |||||||||| Sbjct 13696 ATTAGTCTTCCCAGCTAAGGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATA 13755 Query 18762 TAtttttttGAATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTT 18821 || || || || || | | | || |||||| |||||||| | || |||| Sbjct 13756 TACCTTCTTATTACCAAAAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACA 13815 Query 18822 CATCATATCACAA-TTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTT 18880 ||| | ||| | | ||||| |||| || |||| |||| ||||| || | | |||| | Sbjct 13816 CATTA-ATCCCGAGTTCATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCT 13874 Query 18881 GTTCTATATTTACTGCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATA 18940 ||| ||| || || || ||||| | || | ||| || ||| | Sbjct 13875 TTTCAATAGCAACAGCTTCAACAATAATTCTTTGCACGATTTCTGGATCAGGTCTATTCT 13934 Query 18941 GAAGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCA 19000 | ||| ||| | || ||| ||||||||| ||||| ||| || ||||| || | Sbjct 13935 TTAAATGGGCAAATAACATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTA 13994 Query 19001 ATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAG 19060 |||||||||| || ||||| || ||||| | ||||||||| ||||||||||| || |||| Sbjct 13995 ATTCATTAGAGAAAGTTAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAG 14054 Query 19061 CAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCAT 19120 |||| |||||| |||||| |||||||| | || ||||| ||||||| |||||| ||| Sbjct 14055 CAAAGGATCCACTAAAGAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCAT 14114 Query 19121 AACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATG 19180 | ||||| |||| |||||||||| ||||| | |||||||| | ||||| Sbjct 14115 ATAAGGCATCCTTATCGGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATG 14174 Query 19181 GCATTGTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCAT 19240 | || || | || | || ||||| | | | || | | ||| |||||||| | || Sbjct 14175 GAATAGTATGAATTGCATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTAT 14234 Query 19241 CTATCAATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAA 19300 ||||||| | | || | ||| |||||||| |||| || || || || || || | Sbjct 14235 CTATCAAAAGAGAATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGA 14294 Query 19301 AACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAA 19360 | | | ||||| | | || |||||| ||| || |||| || ||||||||||||| Sbjct 14295 ATGCTTTAGCTTCAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAA 14354 Query 19361 CTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTG 19420 |||| |||||| ||| ||||| || |||||||| | ||| |||| ||||| Sbjct 14355 CTATACCATCAGAAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTAT 14414 Query 19421 AGGTTAATGTA---TTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCC 19477 | ||| || |||||||| | | ||| ||| |||||| | ||||||| | |||| Sbjct 14415 CATTCAATCTATTGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCC 14474 Query 19478 AAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATA 19537 | || ||||| || |||||||||||||| | |||||| ||| ||||| || || |||| Sbjct 14475 AGAATGAAGCTTCAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATA 14534 Query 19538 TAACAAATCTATTTTTATT-TTCTTTAAGAATAGGTTC 19574 |||||||||| || ||| | ||| || ||| ||||| Sbjct 14535 TAACAAATCTTCTTGCATTCTCCTTCAATAAT-GGTTC 14571 >seq1891 Length=76648 Score = 257 bits (284), Expect = 2e-63 Identities = 609/917 (66%), Gaps = 16/917 (2%) Strand=Plus/Plus Query 47876 AAGTGCTATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTAT 47935 |||||||| ||| ||| |||||| || || || | || || |||||| || || Sbjct 36766 AAGTGCTAAAGAACCTAAATTACAAACCGCGGTTTCTTCAGGTGAAGAATATTGAATAAT 36825 Query 47936 TTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTT 47995 |||| ||| ||||| |||| |||| ||| ||||| | |||||| | || Sbjct 36826 TTCACAACAAAGATTTGACGATTTTATAGGACCTAAATTCTTTTGATTAGACTTAATATT 36885 Query 47996 ACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGA 48055 ||| || || || || |||||| | || | || ||||| | || ||||| | || | Sbjct 36886 ACAAGCATCTTTATATAGCATATATGGAATCCCCGTTTCAGTTTGTGATTCTAATATTGC 36945 Query 48056 TTTCCAAACAGTCCTAGCCTT-----TATAACAGCTCTAGCTTTATTATCATGTTCGTAT 48110 | ||| | | |||||| || || | | | | || | |||| ||| Sbjct 36946 TAACCATAACTTATGAGCCTTAACCGTAGAATATGCCAATCCTTGCT-----GTTCATAT 37000 Query 48111 TTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACATTCATTA 48170 || ||| || | |||| || ||||||||||||| | |||||||||| |||||| Sbjct 37001 TTTTCATACAATTCAACAAACTCGTCCCCATACACATCACTTAACCCAGGAGCTTCATTG 37060 Query 48171 GGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATC 48230 || | | ||| ||| || | ||| | ||| |||| ||||||| | ||| |||||| Sbjct 37061 GGGGAAAACAAACTCCAGTCTTTATCTTCTTTAACTCGTTTCATAAACAAATCAGGTATC 37120 Query 48231 CAAAGAGCTATAAAT-AAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTTAAG 48289 || | | | ||||| ||||| |||||||| | || ||||| || ||| | | Sbjct 37121 CATA-ACCCATAAAACAAATCTCTAGTTCTATGCTCCTCATTACCGTGGTTCTTCCGCAT 37179 Query 48290 TTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGG 48349 ||| | || || | |||||||||||||| ||||||| ||| |||| | | || || Sbjct 37180 TTCTAAAATATCAAAGATATCAGCATGCCAAGGTTCTATATACATTGAAAAAGCCCCAGG 37239 Query 48350 TCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGG 48409 || |||| ||| |||||||||| ||| ||||||||||| ||| | || | |||||| || Sbjct 37240 TCTTTTACCACCGCCTTGATCTACATACCTGGCAGTATTATTAAATACACGTAACATGGG 37299 Query 48410 GACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATT 48469 || | || || || | ||||| || || | |||| | |||| | || ||||||| Sbjct 37300 AACTAATCCGTTGGAAACTCCATTCGTACCTGCAATAAATGTTCCGTTGGCCCTTATATC 37359 Query 48470 ACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGT 48529 | || ||||| || || |||| ||| || |||| || | | |||||| Sbjct 37360 ATGCATATGTATACCGATCCCCCCTGATGCTTTCGAGATTAATGCTGCCTCATGAAGGGT 37419 Query 48530 ATCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACA--ACTAGACATT 48587 | || ||||| |||||| ||| || ||||| ||| || ||||| || | | || Sbjct 37420 TTTGTAGATTCCATCTATAGAATCTTCCTTCATAGCTAAAAGGAAACATGACGACAAATA 37479 Query 48588 TGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCTCT 48647 | || | ||||| ||||| |||| || ||||| ||||| |||| |||| | Sbjct 37480 ATTGAATTCC--GTTCCGGAATTGTATAACGTGGGAGAAGCATGTATAAGATATTTTTGG 37537 Query 48648 GATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGAT 48707 || | ||| | |||||| |||| || || || | ||| ||| || ||||||| Sbjct 37538 GACATCAAGTCATATGTCTCAACTACCGATTCAAGATCATCAAAATGAATTCCTATAGCA 37597 Query 48708 ACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATAT 48767 || || | |||||||||||||| |||| ||||| |||| || || | | || Sbjct 37598 ACTCGAAGAAACATATATTGAGGAGTTTCGGAAATTTCATTATCGATCTTTATCAAGTAA 37657 Query 48768 GATTTTTCCAATGTTTT 48784 || || |||||||| || Sbjct 37658 GAATTCTCCAATGTCTT 37674 Score = 223 bits (246), Expect = 4e-53 Identities = 506/758 (67%), Gaps = 26/758 (3%) Strand=Plus/Plus Query 47013 GTTCGTAAATAATACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTA 47072 |||| |||||||||||| |||||||| || || ||| |||| ||||| |||| Sbjct 35870 GTTCTTAAATAATACATTCCAGTCTTCAATCCCTTTTCCCAAGCATAAAAATGACAACTA 35929 Query 47073 GTTAATTTAGAATAACTAGGTT-CTGAAATATGAATATTAAGAGATTGACTCTGATCAAT 47131 |||||||| | | ||||| || || ||||||||| | | ||| |||||||| Sbjct 35930 GTTAATTTTCCAAATGTAGGTGACTTTAA-ATGAATATTCATACTTTGCAGTTGATCAAT 35988 Query 47132 AAATGCACCTCTATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGT 47191 |||| ||||| |||| |||||||| | |||||| |||| ||| ||||||||||| Sbjct 35989 AAATTTACCTCGGTCAGAAGCCATATCAATTATAACCTTTTGACTTATTTCCCATACTGT 36048 Query 47192 TTTATAAATTTGTTTAATGTCTTCTGGGAGATTAG---TATTTTGAATAGATCCTCCgtt 47248 || || | ||||||||| || ||||| | ||| |||||||||| || ||| || Sbjct 36049 CTTGTATAATTGTTTAATTTCAGGTGGGATACTAGCAATATTTTGAATTGA---TCCATT 36105 Query 47249 ttct---ataattttgttttt--taattcatttgaccaaagttttcgttcagttaatgtt 47303 |||| |||||||| ||| | || || | || ||| | | ||| |||| | Sbjct 36106 TTCTAAAATAATTTTATTTCTCATACTTGAATT--CCATAATCCCAAATCAATTAAATCT 36163 Query 47304 tttaaAAGATGAGGATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATA 47363 || | | || |||||| | ||||||||| ||||| ||||||| |||| |||| | Sbjct 36164 TTAATTAAATATTTATTAACCACTTGAAATTCCCCAGAAAGTACTCGACGGGTATACAAG 36223 Query 47364 TTACTTGTATATGGTTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTA 47423 ||| ||||||||||| | | |||||||| ||||| ||||| | ||| || || || Sbjct 36224 TTAGAAGTATATGGTTCAAAACATTCATTAAATCCAAGGATTTGTGAAGTGGAAGCCGTG 36283 Query 47424 GGCATGGATGCAACTAATAAGCTATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNN 47483 ||||| | |||||| | |||| ||| |||| ||| | || | || | Sbjct 36284 GGCATCGGTGCAACAAGTAAGGAATTCCTTAACCCAAAGTTCTTGATATTTTGTTTTAAG 36343 Query 47484 NGTTTCCAATC-----CCAAAGATCTGATGGAACAACATTCCAAAAATCATATTGAAGAA 47538 | |||||| |||||| || || | || ||| | |||| ||||||| | Sbjct 36344 GTATCCCAATCGTCATACAAAGA--AGACGGTTTATGATCCCACATATCAAATTGAAGTA 36401 Query 47539 TTCCTTTACTTATCGGAGAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTT 47598 | || | | | ||| |||| | ||| | || ||| ||||| | | || | || Sbjct 36402 TACCCTGAGATGCAGGACAACCTTCATAAGATTCATAGGGACCATCACGAAATGCCAATT 36461 Query 47599 C-ACAACTTGCTTCCAAT-GCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATT 47656 | | ||||| |||| || || ||||| ||||||||||||| ||||||| || Sbjct 36462 CTGTAGATTGCT--CAATCGCGGCATGGTATATAGTTTCAAATATTTGAATGTTTAAATG 36519 Query 47657 CCTTGCTTCTGATGATTCAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTG 47716 | ||||| | ||| ||||| | | || |||||| | ||||| Sbjct 36520 TTTGGCTTCGGGTGAATCAAATGAAAGTCTTAGTTCAAGAAACAAATCTGCAAGACCTTG 36579 Query 47717 AACACCAATACCAATTGGTCTATGAGTTTTATTAGAAA 47754 |||||||||| |||| |||||||| | ||||| |||| Sbjct 36580 AACACCAATAGCAATAGGTCTATGTTTCTTATTGGAAA 36617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562092077263200