Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq333 248 1e-60 >seq333 Length=169781 Score = 248 bits (274), Expect = 1e-60 Identities = 599/901 (66%), Gaps = 17/901 (2%) Strand=Plus/Plus Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTC 36931 |||||| || | ||||||| || ||||| |||| || ||||| ||||| || | Sbjct 13651 CATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGC 13710 Query 36932 TAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATA---TAGTACTACA 36988 || || ||||| ||||| |||||||||||||||| | |||||||| | || ||| Sbjct 13711 TAAGGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATTACC 13770 Query 36989 TGATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATA 37048 || | || | ||||| || ||||| || | |||| |||||||| | | | Sbjct 13771 A---AAAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGA 13827 Query 37049 GTTTATACCAATTAGTTTTACTGGAATTGCATCT-TGAAGAAATAGTTTTTCTATTATTA 37107 ||| ||||| | | | ||||| | ||||| |||| | || ||||| || | Sbjct 13828 GTTCATACCTAACAAACTAACTGGTAAAGCATCAGTGAA-ATATTCCTTTTCAATAGCAA 13886 Query 37108 CAGCATCTT---TAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATT 37164 |||| || ||| | | | || || || |||| | || ||||||| Sbjct 13887 CAGCTTCAACAATAATTCTTTGCACGATTTCTGGATCAGGTCT---ATTCTTTAAATGGG 13943 Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224 ||| || | ||| ||||||||| |||||| ||||||||||| || |||||||||| Sbjct 13944 CAAATAACATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAG 14003 Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284 | || ||||||||||||||||| |||||||| || | ||| || || | ||||| |||| Sbjct 14004 AGAAAGTTAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATC 14063 Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAAC 37344 || ||||||||||||||||| || ||||| || || | | | | | | | | Sbjct 14064 CACTAAAGAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCAT 14123 Query 37345 TATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTT 37404 | ||| | |||||||| | ||| | ||||| || |||| ||| || | Sbjct 14124 CCTTATCGGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTAT 14183 Query 37405 CAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTA 37464 |||||| | || | ||| | ||||| | ||| | | ||||||||| || | | Sbjct 14184 GAATTGCATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAA 14243 Query 37465 AACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG 37524 | ||| | |||||| ||||| ||||||| || || |||||||| || ||| Sbjct 14244 GAGAATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAG 14303 Query 37525 CTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCAT 37584 |||||| | |||||| || | | || | | |||| |||||||||||||| |||| Sbjct 14304 CTTCAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCAT 14363 Query 37585 CACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC---ATCATTTGATA 37641 || ||| |||||||| || | || || |||| | ||| |||||| || Sbjct 14364 CAGAAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATC 14423 Query 37642 ATTTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTG 37701 || |||||||| | | ||| || |||||| | ||| ||| ||||||| || | Sbjct 14424 TATTGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAG 14483 Query 37702 CCAATGCACGTTTATACATCGTCCAAATATCATTATGTTGTATTGGAAATATTACAAATC 37761 | || ||||||||| ||| || |||| || | ||||| ||||| ||||||| Sbjct 14484 CTTCAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATC 14543 Query 37762 T 37762 | Sbjct 14544 T 14544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592299178575200