Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq333 170 1e-37 seq1891 154 7e-33 >seq333 Length=169781 Score = 170 bits (188), Expect = 1e-37 Identities = 327/477 (69%), Gaps = 4/477 (1%) Strand=Plus/Plus Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947 |||||| | || ||| ||| || ||||||| |||||| | ||| |||||||| || Sbjct 50620 ATTTGGTGAAAACAAAGTCCATTCTCCATTTTGTTCAACTCGTTTCATGAATAAATCCGG 50679 Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007 |||||| | || ||||||||||| ||||| |||||||| || ||| ||| ||| | Sbjct 50680 AATCCATAACGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGGAATTTTTTCT 50739 Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067 | ||| | ||||||||||||||| | ||||| ||||||||||| | |||||| || Sbjct 50740 AATATCAATGAAATCAAAAATATCCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCTCC 50799 Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127 | ||| || ||||||||||| || || | || || | ||||||||| | | ||| Sbjct 50800 TGGTCTCTTGTTACCACCTTGATCAACATAACGAGCCGTGTTGTTGAAAACTCTAACCAT 50859 Query 26128 TGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186 || | |||| | |||| || | || || || | | ||| | || || || | | | Sbjct 50860 GGGGA-TAATACCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCCCGGA 50918 Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAA 26245 ||| ||| ||| | || || |||||||| | || ||||| ||||| ||| | Sbjct 50919 TATTATGAATATGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTCTTTA 50978 Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305 || || ||| |||| || | ||| ||| | ||||| | | || ||||| ||||| Sbjct 50979 AC-GTGTCGTAAATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACGAAGAC 51037 Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362 | ||| | | | || || | ||| ||||| || || | |||| ||| | ||| Sbjct 51038 ATTTGTGGACTTGGAGTACCAGCATTGAATAACGTGGGGGACCCATGGGTAAAGTAT 51094 Score = 109 bits (120), Expect = 3e-19 Identities = 177/252 (70%), Gaps = 6/252 (2%) Strand=Plus/Plus Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075 ||||| |||| ||||||| ||| | | ||| ||||| ||||||||||||||||| Sbjct 49772 AATTCACCAGCTAAAACTCGTCTAGAATAAATGTTGGAAGTATATGGTTCAAAACATTCA 49831 Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135 ||||| || |||||||| || || || || || |||||| || | |||| || ||| Sbjct 49832 TTATTACCCAAGATTTGTGATGTTGACGCCGTAGGCATTGGAGCAACCAATAATGAGTTT 49891 Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195 || ||||||| ||| | || | ||| || || |||||||||| || ||| || Sbjct 49892 CTTAAACCATGTTTGGCCATTTTTTGCTTCAAACTATCCCAATC-CCATAATTCAGTA-- 49948 Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGATCA 25255 | | || | || ||||||||||||| || ||||| | ||||| ||| || Sbjct 49949 -GGTTTTC--TTTCCCATAAATCAAATTGCAATAATCCTTGAGAAGCAGGTGATCCTTCG 50005 Query 25256 AAAGTTGAATAT 25267 |||||| |||| Sbjct 50006 TAAGTTGGATAT 50017 >seq1891 Length=76648 Score = 154 bits (170), Expect = 7e-33 Identities = 352/520 (68%), Gaps = 10/520 (2%) Strand=Plus/Plus Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724 || ||||| ||||| | || | || |||||| | ||||||||||||||| |||||| Sbjct 35840 GTGAATTGAATAGCTCTTGAAGCAGCTTGAGTTCTTAAATAATACATTCCAGTCTTCAAT 35899 Query 24725 TTCTTCTTCCAACCGTAAAAATG-CATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAA 24783 ||| | |||| | |||||||| || | |||| |||| ||| | | ||| | ||| Sbjct 35900 CCCTTTTCCCAAGCATAAAAATGACAACTA-GTTAATTTTCCAAATGTAGGTGACTTTAA 35958 Query 24784 AAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAAT 24843 | | ||||| ||| ||| || ||| || || | ||| | ||||| Sbjct 35959 ATGAATATTCATACTTTGCAGTTGATCAATAAATTTACCTCGGTCAGAAGCCATATCAAT 36018 Query 24844 GAT--CGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGA 24901 || | |||| | || | | || |||| |||||| | ||| || |||| ||| Sbjct 36019 TATAACCTTTTGACTTATTTCCCATA--CTGTCTTGTATAATTGTTTAATTTCAGGTGGG 36076 Query 24902 ATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAAT-CTCATATTCGG 24960 ||||| ||||||||||||| ||||||||||||| |||| || | | |||||| | | Sbjct 36077 ATACTAGCAATATTTTGAATTGATCCATTTTCTAA-AATAATTTTATTTCTCATACTTGA 36135 Query 24961 TGTCCA-AAGATTAATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATT 25019 |||| || || | | || |||| |||| || | |||||| | | ||||| Sbjct 36136 ATTCCATAATCCCAAATCAATTAA-ATCTTTAATTAAATATTTATTAACCACTTGAAATT 36194 Query 25020 CTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTAT 25079 | ||||| | |||| | | | ||||| ||||| |||||||||||||||||||| Sbjct 36195 CCCCAGAAAGTACTCGACGGGTATACAAGTTAGAAGTATATGGTTCAAAACATTCATTAA 36254 Query 25080 TTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCA 25139 ||| | |||||| ||||| || || || ||||| ||| | | || ||||| || | Sbjct 36255 ATCCAAGGATTTGTGAAGTGGAAGCCGTGGGCATCGGTGCAACAAGTAAGGAATTCCTTA 36314 Query 25140 AACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179 | ||| | || || | ||||||||| |||||||||| Sbjct 36315 ACCCAAAGTTCTTGATATTTTGTTTTAAGGTATCCCAATC 36354 Score = 132 bits (146), Expect = 2e-26 Identities = 293/436 (67%), Gaps = 14/436 (3%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| ||||| || ||||| | ||||||| |||||||| | ||| || || || Sbjct 37102 CATAAACAAATCAGGTATCCATAACCCATAAAACAAATCTCTAGTTCTATGCTCCTCATT 37161 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||||| ||||| | ||||| | |||||| ||||| | ||||| ||||||| ||| Sbjct 37162 ACCGTGGTTCTTCCGCATTTCTAAAATATCAAAGATATCAGCATGCCAAGGTTCTATATA 37221 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || | |||| || |||||| || || ||||||||||| || || ||||| | ||| Sbjct 37222 CATTGAAAAAGCCCCAGGTCTTTTACCACCGCCTTGATCTACATACCTGGCAGTATTATT 37281 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTG----TGCTATGAATCT 26168 || || ||||| ||||||||||| | |||| ||| || | ||| || ||| Sbjct 37282 AAATACACGTAACATGGGAACTAATCCGTTGGAAACTCCATTCGTACCTGCAATAAAT-- 37339 Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228 | ||| | | || ||||| || ||| |||||||| || || | ||| || | Sbjct 37340 --GTTCCGTTGGCCCTTATATCATGCATATGTATACCGATCCCCCCTGATGCTTTCGAGA 37397 Query 26229 TAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288 | ||| || || || | | | ||||| | ||| ||| | ||||| ||| Sbjct 37398 TTAATGCTGCCTCATGAAGGGTTTTGTAGATTCCATCTATAGAATCTTCCTTCATAGCTA 37457 Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTT--GTTCCTGAATTAAATAATGTCGGTGT 26346 | | ||||| || || || | | ||| || ||||| ||||| |||| || || | Sbjct 37458 AAAGGAAACATGACGACAAAT--AATTGAATTCCGTTCCGGAATTGTATAACGTGGGAGA 37515 Query 26347 AGCATGAGTATAATAT 26362 ||||| |||||| || Sbjct 37516 AGCAT--GTATAAGAT 37529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253032660258500