Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq333 170 1e-37
seq1891 154 7e-33
>seq333
Length=169781
Score = 170 bits (188), Expect = 1e-37
Identities = 327/477 (69%), Gaps = 4/477 (1%)
Strand=Plus/Plus
Query 25888 ATTTGGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGG 25947
|||||| | || ||| ||| || ||||||| |||||| | ||| |||||||| ||
Sbjct 50620 ATTTGGTGAAAACAAAGTCCATTCTCCATTTTGTTCAACTCGTTTCATGAATAAATCCGG 50679
Query 25948 AATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTT 26007
|||||| | || ||||||||||| ||||| |||||||| || ||| ||| ||| |
Sbjct 50680 AATCCATAACGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGGAATTTTTTCT 50739
Query 26008 TAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACC 26067
| ||| | ||||||||||||||| | ||||| ||||||||||| | |||||| ||
Sbjct 50740 AATATCAATGAAATCAAAAATATCCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCTCC 50799
Query 26068 TTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACAT 26127
| ||| || ||||||||||| || || | || || | ||||||||| | | |||
Sbjct 50800 TGGTCTCTTGTTACCACCTTGATCAACATAACGAGCCGTGTTGTTGAAAACTCTAACCAT 50859
Query 26128 TGGAACTAATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAA 26186
|| | |||| | |||| || | || || || | | ||| | || || || | | |
Sbjct 50860 GGGGA-TAATACCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCCCGGA 50918
Query 26187 TATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACA-ATCTGAA 26245
||| ||| ||| | || || |||||||| | || ||||| ||||| ||| |
Sbjct 50919 TATTATGAATATGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTCTTTA 50978
Query 26246 ACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGAT 26305
|| || ||| |||| || | ||| ||| | ||||| | | || ||||| |||||
Sbjct 50979 AC-GTGTCGTAAATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACGAAGAC 51037
Query 26306 AATTGCGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATAT 26362
| ||| | | | || || | ||| ||||| || || | |||| ||| | |||
Sbjct 51038 ATTTGTGGACTTGGAGTACCAGCATTGAATAACGTGGGGGACCCATGGGTAAAGTAT 51094
Score = 109 bits (120), Expect = 3e-19
Identities = 177/252 (70%), Gaps = 6/252 (2%)
Strand=Plus/Plus
Query 25016 AATTCTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCA 25075
||||| |||| ||||||| ||| | | ||| ||||| |||||||||||||||||
Sbjct 49772 AATTCACCAGCTAAAACTCGTCTAGAATAAATGTTGGAAGTATATGGTTCAAAACATTCA 49831
Query 25076 TTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTT 25135
||||| || |||||||| || || || || || |||||| || | |||| || |||
Sbjct 49832 TTATTACCCAAGATTTGTGATGTTGACGCCGTAGGCATTGGAGCAACCAATAATGAGTTT 49891
Query 25136 CTCAAACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATCTAAATTATTATCTAAC 25195
|| ||||||| ||| | || | ||| || || |||||||||| || ||| ||
Sbjct 49892 CTTAAACCATGTTTGGCCATTTTTTGCTTCAAACTATCCCAATC-CCATAATTCAGTA-- 49948
Query 25196 TCGATATCGTTATCATATAAATCAAATTGTAACAATCCACTTGCTGCAGGCGATTGATCA 25255
| | || | || ||||||||||||| || ||||| | ||||| ||| ||
Sbjct 49949 -GGTTTTC--TTTCCCATAAATCAAATTGCAATAATCCTTGAGAAGCAGGTGATCCTTCG 50005
Query 25256 AAAGTTGAATAT 25267
|||||| ||||
Sbjct 50006 TAAGTTGGATAT 50017
>seq1891
Length=76648
Score = 154 bits (170), Expect = 7e-33
Identities = 352/520 (68%), Gaps = 10/520 (2%)
Strand=Plus/Plus
Query 24665 GTAAATTGCTTAGCTGATACTGCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAAT 24724
|| ||||| ||||| | || | || |||||| | ||||||||||||||| ||||||
Sbjct 35840 GTGAATTGAATAGCTCTTGAAGCAGCTTGAGTTCTTAAATAATACATTCCAGTCTTCAAT 35899
Query 24725 TTCTTCTTCCAACCGTAAAAATG-CATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAA 24783
||| | |||| | |||||||| || | |||| |||| ||| | | ||| | |||
Sbjct 35900 CCCTTTTCCCAAGCATAAAAATGACAACTA-GTTAATTTTCCAAATGTAGGTGACTTTAA 35958
Query 24784 AAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAAT 24843
| | ||||| ||| ||| || ||| || || | ||| | |||||
Sbjct 35959 ATGAATATTCATACTTTGCAGTTGATCAATAAATTTACCTCGGTCAGAAGCCATATCAAT 36018
Query 24844 GAT--CGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGA 24901
|| | |||| | || | | || |||| |||||| | ||| || |||| |||
Sbjct 36019 TATAACCTTTTGACTTATTTCCCATA--CTGTCTTGTATAATTGTTTAATTTCAGGTGGG 36076
Query 24902 ATACTTGCAATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAAT-CTCATATTCGG 24960
||||| ||||||||||||| ||||||||||||| |||| || | | |||||| | |
Sbjct 36077 ATACTAGCAATATTTTGAATTGATCCATTTTCTAA-AATAATTTTATTTCTCATACTTGA 36135
Query 24961 TGTCCA-AAGATTAATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATT 25019
|||| || || | | || |||| |||| || | |||||| | | |||||
Sbjct 36136 ATTCCATAATCCCAAATCAATTAA-ATCTTTAATTAAATATTTATTAACCACTTGAAATT 36194
Query 25020 CTCCAGACAAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTAT 25079
| ||||| | |||| | | | ||||| ||||| ||||||||||||||||||||
Sbjct 36195 CCCCAGAAAGTACTCGACGGGTATACAAGTTAGAAGTATATGGTTCAAAACATTCATTAA 36254
Query 25080 TTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCA 25139
||| | |||||| ||||| || || || ||||| ||| | | || ||||| || |
Sbjct 36255 ATCCAAGGATTTGTGAAGTGGAAGCCGTGGGCATCGGTGCAACAAGTAAGGAATTCCTTA 36314
Query 25140 AACCATATTTAACAATCTCTTGTTTTAATTTATCCCAATC 25179
| ||| | || || | ||||||||| ||||||||||
Sbjct 36315 ACCCAAAGTTCTTGATATTTTGTTTTAAGGTATCCCAATC 36354
Score = 132 bits (146), Expect = 2e-26
Identities = 293/436 (67%), Gaps = 14/436 (3%)
Strand=Plus/Plus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| ||||| || ||||| | ||||||| |||||||| | ||| || || ||
Sbjct 37102 CATAAACAAATCAGGTATCCATAACCCATAAAACAAATCTCTAGTTCTATGCTCCTCATT 37161
Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052
||||| ||||| | ||||| | |||||| ||||| | ||||| ||||||| |||
Sbjct 37162 ACCGTGGTTCTTCCGCATTTCTAAAATATCAAAGATATCAGCATGCCAAGGTTCTATATA 37221
Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112
|| | |||| || |||||| || || ||||||||||| || || ||||| | |||
Sbjct 37222 CATTGAAAAAGCCCCAGGTCTTTTACCACCGCCTTGATCTACATACCTGGCAGTATTATT 37281
Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTG----TGCTATGAATCT 26168
|| || ||||| ||||||||||| | |||| ||| || | ||| || |||
Sbjct 37282 AAATACACGTAACATGGGAACTAATCCGTTGGAAACTCCATTCGTACCTGCAATAAAT-- 37339
Query 26169 TGGATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAA 26228
| ||| | | || ||||| || ||| |||||||| || || | ||| || |
Sbjct 37340 --GTTCCGTTGGCCCTTATATCATGCATATGTATACCGATCCCCCCTGATGCTTTCGAGA 37397
Query 26229 TAGCTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTA 26288
| ||| || || || | | | ||||| | ||| ||| | ||||| |||
Sbjct 37398 TTAATGCTGCCTCATGAAGGGTTTTGTAGATTCCATCTATAGAATCTTCCTTCATAGCTA 37457
Query 26289 ATAAAAAACAAGAAGATAATTGCGAATGAGTT--GTTCCTGAATTAAATAATGTCGGTGT 26346
| | ||||| || || || | | ||| || ||||| ||||| |||| || || |
Sbjct 37458 AAAGGAAACATGACGACAAAT--AATTGAATTCCGTTCCGGAATTGTATAACGTGGGAGA 37515
Query 26347 AGCATGAGTATAATAT 26362
||||| |||||| ||
Sbjct 37516 AGCAT--GTATAAGAT 37529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253032660258500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |