Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq899 118 1e-21 >seq899 Length=17586 Score = 118 bits (130), Expect = 1e-21 Identities = 352/535 (66%), Gaps = 11/535 (2%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 |||||| | | ||||| | |||| || ||| || || ||||| || || || || Sbjct 14815 AATGGTTTTAAATGTTCTTTAACACAAACTGGAGCTTGACCTGGACCACCTCCACCGTGA 14756 Query 138222 GGAATACAG--AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATG 138279 | ||| || ||||| ||||| | ||||| |||||||||||| ||||| | || | || Sbjct 14755 G--ATAAAGCAAATGTTTTATGAATATTTAAATGACATACATCAGCACCCAAATCTCCTG 14698 Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339 | || ||||| || |||||||| | ||| || ||||| | ||| || ||||||| Sbjct 14697 GAGATGTAAGACCAACTTGTGCATTCATATTAGCCCCATCCAAATAAACTAACCCACCAT 14638 Query 138340 TGTCATGAACGATCTTACATATC-TGTCTGATGTTTGTTTCAAATACACCATGAGTCGAT 138398 | | |||||| || || || | ||| | || | ||| || | ||||| || || Sbjct 14637 TCTTATGAACAAT-TTCAATGGCTTGTTTAATACCAGGTTCGAAAAGACCATATGTTGAA 14579 Query 138399 GGATATGTAATCATAATACATGAGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGA 138458 ||||| ||||||||||| | | || | | | || | || || | | || | Sbjct 14578 GGATAAGTAATCATAATCGAACAAAGATTAGCGGCATGTTGTACGGCCTTTTCTTGTAAA 14519 Query 138459 TCTTTGATGTCTATGTTGCCATCATCATCACACTTGACACCTACAACTTTCATTCCTGCC 138518 || | | || || ||||| || ||| || || |||||||||| ||| | Sbjct 14518 TCGATCAAATCAATAGAACCATCGTCTAAACATTTCACGGGGACAACTTTCAATCCACAC 14459 Query 138519 ATGACTGCACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCT- 138577 ||| | || |||||||| |||||||| ||||| |||| || ||||| | |||||| Sbjct 14458 ATGGCAGCCGAGGCAGGATTGGTTCCATGAGCTGAAACTGGAATAAGACAAATATTTCTG 14399 Query 138578 --TTTATCATCTCCTGATCCTTGATGATATGCTTGGATTGCTAACAGTCCTGCATACTCA 138635 || || || ||| | || |||||| ||| || | | ||| | || ||| Sbjct 14398 GCTTCATAGTCCCCTCTTGATTTATGATAGGCTCTAATAAGCGATAATCCAGTGTATTCA 14339 Query 138636 CCCTGTGATCCTGCGTTAGGTTGTAATGATA-TAGAATCAAAACCTGTGATATCA 138689 || || | ||| | ||||| || | || ||| |||||| || ||||| ||| Sbjct 14338 CCTTGAGCTCCAGAATTAGG-CATAGTAGTAGTAGCATCAAATCCAGTGATGTCA 14285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578981174797600