Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq333 201 1e-46 seq2235 93.3 5e-14 >seq333 Length=169781 Score = 201 bits (222), Expect = 1e-46 Identities = 821/1280 (64%), Gaps = 33/1280 (3%) Strand=Plus/Minus Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388 |||||||||||||| ||||| || || ||||| || ||| | | || | ||||| Sbjct 51066 TTCAATGCTGGTACTCCAAGTCCACAAATGTCTTCGTGTTTCTTGGTTGCTATGAAGGAA 51007 Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448 || || || | ||||| || | || | | | |||||| ||| || ||| | ||| Sbjct 51006 GATTCCATTGATGGTATTTACGACACGTTAAAGACGTGTGCTTTAATTTCCAAGAGTGCT 50947 Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508 || ||||||||| | || || ||| || | | |||| | ||| |||| || || Sbjct 50946 GGTGGTATTGGGTTACATATTCATAATATCCGGGCCACTGGTTCTTATATTGCTGGTACC 50887 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 |||||| || | |||||||| || ||| || | || || ||| ||| || || ||| Sbjct 50886 AATGGTACTTCCAACGGTATTATCCCCATGGTTAGAGTTTTCAACAACACGGCTCGTTAT 50827 Query 75569 GTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || ||||| || || |||| || | | || | || || ||||| ||| Sbjct 50826 GTTGATCAA---GGTGGTAACAAGAGACCAGGAGCTTTTGCCCTTTATTTAGAACCTTGG 50770 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 ||||| ||||| | || ||| |||| | || || ||| | ||||| | | Sbjct 50769 CATGCGGATATTTTTGATTTCATTGATATTAGAAAAAATTCCGGTAAGGAAGAAATTAGA 50710 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 ||||||| | || | | | |||||||| || | |||||||| || ||||| | Sbjct 50709 GCTAGAGATTTATTCCCGGCGTTATGGATTCCGGATTTATTCATGAAACGAGTTGAACAA 50650 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802 ||| ||||| || | || | ||| | | || || ||| | | || | ||| Sbjct 50649 AATGGAGAATGGACTTTGTTTTCACCAAATGAAGCTCCTGGTTTACCTGATGTTTATGGT 50590 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || || ||||||| | || || |||||| || ||| | | | | ||| | Sbjct 50589 GATGAATTTGAAGAATTATATGAAAGATATGAAAGAGAAGGTCGTGGTACTAAAACTAT- 50531 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | | || ||| | |||| | || | || || || || || || |||| Sbjct 50530 CAAGGCTCAAAAATTATGGTATTCTATCTTGGAAGCTCAAACTGAAACAGGTACTCCATT 50471 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 |||| | || ||||||||||||||||| || || ||||||||||| || || || Sbjct 50470 TATGTTATATAAGGATGCTTGTAACAAAAAATCCAATCAAAAGAATTTAGGGGTTATTAA 50411 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 || ||| | || |||||| | || || | | | ||||| || || || Sbjct 50410 ATCTTCTAATTTATGTTGTGAAATTGTGGAATATTCTGCTCCTGATGAAGTTGCCGTGTG 50351 Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACT---TT 76095 ||||| || || || ||| ||||| | || | ||| || | || || | Sbjct 50350 TAATTTAGCTTCTATTGCCATTCCATCATTCGTGGAAACTGATGAAAATCATTCTTGGTA 50291 Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155 | ||| ||||||| | ||||| | || || | ||||| ||| |||| ||||| || Sbjct 50290 TAATTTTGAAAAATTACATGAGGTGACTAAAGTAGTTACTCGTAATTTAAATCGAGTTAT 50231 Query 76156 TGACAGAAATTTTTATCCCGTTGAGACTG-CGCGA--AAGTCTAATATGCGACACAGACC 76212 ||| | || | |||||| ||| ||| || | || || |||||| || | ||||| Sbjct 50230 TGATCGTAACTATTATCCAGTT---CCTGAAGCCAAGAATTCAAATATGAGAAATAGACC 50174 Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT---TTTGTGCCGCTACGCATT 76269 | | |||||||| || ||| | || |||| |||||| ||| | ||| |||| Sbjct 50173 CGTGGCCTTGGGTGTCCAGGGTTTAGCTGATGCATTTATGAGTTTAAG--ATTAC-CATT 50117 Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329 |||||| | ||||| ||| | ||| || || || |||||||| ||||| || | Sbjct 50116 TGATTCTCAAGAAGCTCGGGAATTAAATATTCAAATTTTCGAAACCATTTATCATGCTGC 50057 Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389 | || | |||||| ||| ||| |||| | ||| || | || || || Sbjct 50056 TGTTGAATCCTCGGTTGAATTAGCTCAAGAAGAAGGCGCATATCCAACTTACGAAGGATC 49997 Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA 76449 || || || ||||| | | || |||||| | |||||| | ||||| | || || || Sbjct 49996 ACCTGCTTCTCAAGGATTATTGCAATTTGATTTATGGGAAAG-AAAACCTA-CTGAATTA 49939 Query 76450 --CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507 || |||||| | | ||| || || | | ||| | | ||| | ||| Sbjct 49938 TGGGATTGGGATAGTTTGAAGCAAAAAATGGCCAAACATGGTTTAAGAAACTCATTATTG 49879 Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567 | || |||||||| || || || || ||||||||||||||||||||||||| |||||| Sbjct 49878 GTTGCTCCAATGCCTACGGCGTCAACATCACAAATCTTGGGTAATAATGAATGTTTTGAA 49819 Query 76568 CCATACACAACAAACATCTA 76587 ||||| || | ||||| || Sbjct 49818 CCATATACTTCCAACATTTA 49799 >seq2235 Length=55310 Score = 93.3 bits (102), Expect = 5e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || || || || || || || ||||| ||||| || ||||| || || || || Sbjct 20485 GGGGCAAAAATTCCTCGTGGGGCTATTCTCTCGGGTCCTCCCGGTACTGGTAAAACTCTT 20426 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394 |||| |||| || |||||| | || ||||| || | || |||| | | Sbjct 20425 ATCGCGAAGGCCACTGCAGGTGAAGCTGGGGTACCATTTTATTCTGTT-TCTGGTTCTGA 20367 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 ||||| |||||||||||||| || ||||||| || ||||| ||| | || | | || Sbjct 20366 ATTTGTTGAGATGTTTGTTGGGGTAGGTGCCAGTAGAGTTCGTGATTTATTCAAGACTGC 20307 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499 ||| |||||| |||| |||||| || ||||||| |||||||| Sbjct 20306 CCGAGAAAATGCGCCATCTATTGTATTTGTTGATGAAATTGATGC 20262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596551852054400