Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq333 201 1e-46
seq2235 93.3 5e-14
>seq333
Length=169781
Score = 201 bits (222), Expect = 1e-46
Identities = 821/1280 (64%), Gaps = 33/1280 (3%)
Strand=Plus/Minus
Query 75329 TTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 75388
|||||||||||||| ||||| || || ||||| || ||| | | || | |||||
Sbjct 51066 TTCAATGCTGGTACTCCAAGTCCACAAATGTCTTCGTGTTTCTTGGTTGCTATGAAGGAA 51007
Query 75389 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 75448
|| || || | ||||| || | || | | | |||||| ||| || ||| | |||
Sbjct 51006 GATTCCATTGATGGTATTTACGACACGTTAAAGACGTGTGCTTTAATTTCCAAGAGTGCT 50947
Query 75449 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 75508
|| ||||||||| | || || ||| || | | |||| | ||| |||| || ||
Sbjct 50946 GGTGGTATTGGGTTACATATTCATAATATCCGGGCCACTGGTTCTTATATTGCTGGTACC 50887
Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568
|||||| || | |||||||| || ||| || | || || ||| ||| || || |||
Sbjct 50886 AATGGTACTTCCAACGGTATTATCCCCATGGTTAGAGTTTTCAACAACACGGCTCGTTAT 50827
Query 75569 GTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|| ||||| || || |||| || | | || | || || ||||| |||
Sbjct 50826 GTTGATCAA---GGTGGTAACAAGAGACCAGGAGCTTTTGCCCTTTATTTAGAACCTTGG 50770
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
||||| ||||| | || ||| |||| | || || ||| | ||||| | |
Sbjct 50769 CATGCGGATATTTTTGATTTCATTGATATTAGAAAAAATTCCGGTAAGGAAGAAATTAGA 50710
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742
||||||| | || | | | |||||||| || | |||||||| || ||||| |
Sbjct 50709 GCTAGAGATTTATTCCCGGCGTTATGGATTCCGGATTTATTCATGAAACGAGTTGAACAA 50650
Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGT 75802
||| ||||| || | || | ||| | | || || ||| | | || | |||
Sbjct 50649 AATGGAGAATGGACTTTGTTTTCACCAAATGAAGCTCCTGGTTTACCTGATGTTTATGGT 50590
Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862
|| || ||||||| | || || |||||| || ||| | | | | ||| |
Sbjct 50589 GATGAATTTGAAGAATTATATGAAAGATATGAAAGAGAAGGTCGTGGTACTAAAACTAT- 50531
Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921
| || | | | || ||| | |||| | || | || || || || || || ||||
Sbjct 50530 CAAGGCTCAAAAATTATGGTATTCTATCTTGGAAGCTCAAACTGAAACAGGTACTCCATT 50471
Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981
|||| | || ||||||||||||||||| || || ||||||||||| || || ||
Sbjct 50470 TATGTTATATAAGGATGCTTGTAACAAAAAATCCAATCAAAAGAATTTAGGGGTTATTAA 50411
Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041
|| ||| | || |||||| | || || | | | ||||| || || ||
Sbjct 50410 ATCTTCTAATTTATGTTGTGAAATTGTGGAATATTCTGCTCCTGATGAAGTTGCCGTGTG 50351
Query 76042 CAATTTGGCATCAATCGCCCTTCCAAAGTATGT---CAATGAAGAGACTCGCACT---TT 76095
||||| || || || ||| ||||| | || | ||| || | || || |
Sbjct 50350 TAATTTAGCTTCTATTGCCATTCCATCATTCGTGGAAACTGATGAAAATCATTCTTGGTA 50291
Query 76096 TGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCAT 76155
| ||| ||||||| | ||||| | || || | ||||| ||| |||| ||||| ||
Sbjct 50290 TAATTTTGAAAAATTACATGAGGTGACTAAAGTAGTTACTCGTAATTTAAATCGAGTTAT 50231
Query 76156 TGACAGAAATTTTTATCCCGTTGAGACTG-CGCGA--AAGTCTAATATGCGACACAGACC 76212
||| | || | |||||| ||| ||| || | || || |||||| || | |||||
Sbjct 50230 TGATCGTAACTATTATCCAGTT---CCTGAAGCCAAGAATTCAAATATGAGAAATAGACC 50174
Query 76213 TATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT---TTTGTGCCGCTACGCATT 76269
| | |||||||| || ||| | || |||| |||||| ||| | ||| ||||
Sbjct 50173 CGTGGCCTTGGGTGTCCAGGGTTTAGCTGATGCATTTATGAGTTTAAG--ATTAC-CATT 50117
Query 76270 TGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATC 76329
|||||| | ||||| ||| | ||| || || || |||||||| ||||| || |
Sbjct 50116 TGATTCTCAAGAAGCTCGGGAATTAAATATTCAAATTTTCGAAACCATTTATCATGCTGC 50057
Query 76330 CCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTC 76389
| || | |||||| ||| ||| |||| | ||| || | || || ||
Sbjct 50056 TGTTGAATCCTCGGTTGAATTAGCTCAAGAAGAAGGCGCATATCCAACTTACGAAGGATC 49997
Query 76390 TCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTA 76449
|| || || ||||| | | || |||||| | |||||| | ||||| | || || ||
Sbjct 49996 ACCTGCTTCTCAAGGATTATTGCAATTTGATTTATGGGAAAG-AAAACCTA-CTGAATTA 49939
Query 76450 --CGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507
|| |||||| | | ||| || || | | ||| | | ||| | |||
Sbjct 49938 TGGGATTGGGATAGTTTGAAGCAAAAAATGGCCAAACATGGTTTAAGAAACTCATTATTG 49879
Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567
| || |||||||| || || || || ||||||||||||||||||||||||| ||||||
Sbjct 49878 GTTGCTCCAATGCCTACGGCGTCAACATCACAAATCTTGGGTAATAATGAATGTTTTGAA 49819
Query 76568 CCATACACAACAAACATCTA 76587
||||| || | ||||| ||
Sbjct 49818 CCATATACTTCCAACATTTA 49799
>seq2235
Length=55310
Score = 93.3 bits (102), Expect = 5e-14
Identities = 157/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335
|| || || || || || || || ||||| ||||| || ||||| || || || ||
Sbjct 20485 GGGGCAAAAATTCCTCGTGGGGCTATTCTCTCGGGTCCTCCCGGTACTGGTAAAACTCTT 20426
Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394
|||| |||| || |||||| | || ||||| || | || |||| | |
Sbjct 20425 ATCGCGAAGGCCACTGCAGGTGAAGCTGGGGTACCATTTTATTCTGTT-TCTGGTTCTGA 20367
Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454
||||| |||||||||||||| || ||||||| || ||||| ||| | || | | ||
Sbjct 20366 ATTTGTTGAGATGTTTGTTGGGGTAGGTGCCAGTAGAGTTCGTGATTTATTCAAGACTGC 20307
Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGC 175499
||| |||||| |||| |||||| || ||||||| ||||||||
Sbjct 20306 CCGAGAAAATGCGCCATCTATTGTATTTGTTGATGAAATTGATGC 20262
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596551852054400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |