Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq221 159 6e-34
seq1836 158 2e-33
seq481 140 6e-28
>seq221
Length=38424
Score = 159 bits (176), Expect = 6e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
||||||||| |||| | |||| ||| || |||| ||||| ||||| || ||
Sbjct 37653 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACT 37712
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| |||||| ||| || |||||||| || ||||| |||||||| ||||||||||| ||
Sbjct 37713 TAAGGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 37772
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| ||||| |||||||| || |||| ||| | ||| ||| || ||||| || || ||
Sbjct 37773 AATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGAC 37832
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363
||| | ||| || || ||||| |||| || || || || |||||||||||
Sbjct 37833 TTCCAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATTTT 37883
>seq1836
Length=79629
Score = 158 bits (174), Expect = 2e-33
Identities = 176/235 (75%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 193126 TTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTAT 193185
||||| |||||||||||||| | |||| || || |||| || || ||||| |
Sbjct 56883 TTTATTGACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGT 56942
Query 193186 AGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGAT 193245
| || ||||| |||||| || |||||||| || || |||||||||||||| ||||| |
Sbjct 56943 AATCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGT 57002
Query 193246 CAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAG 193305
|||| || || ||||| || ||||| || || | ||| | ||| ||| || || ||||
Sbjct 57003 CAGGTGGAATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAG 57062
Query 193306 ACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
| |||||||||| || ||||| ||||| |||| || || || || ||||||||
Sbjct 57063 ATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117
Score = 150 bits (166), Expect = 3e-31
Identities = 175/236 (74%), Gaps = 0/236 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | |||| || || || | || || || ||
Sbjct 57110 ATTTGCATACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTG 57169
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| ||||| |||||| || ||||| || || ||||||||||| ||||| |||||
Sbjct 57170 TAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGG 57229
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| || || || ||||| || ||||| ||||||| || | || |||||| || |||
Sbjct 57230 TCTGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAA 57289
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||||| || ||||| ||||| |||| || || || || ||||||||
Sbjct 57290 GATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345
>seq481
Length=384
Score = 140 bits (154), Expect = 6e-28
Identities = 140/182 (77%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238
|| || ||||| ||||| |||||| || ||||| || || ||||||||||| |||||
Sbjct 27 ATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTT 86
Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298
||||| ||||| || || ||||| || ||||| ||||||| || | || ||||||
Sbjct 87 TGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTG 146
Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358
|| ||||| |||||||||| || ||||| ||||| |||| || || || || ||||||
Sbjct 147 TCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGC 206
Query 193359 AT 193360
||
Sbjct 207 AT 208
Score = 113 bits (124), Expect = 8e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||||||||||| | |||| || || || | || || || ||
Sbjct 201 ATTTGCATACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTG 260
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| ||||| |||||| || ||||| || || ||||||||||| ||||| |||||
Sbjct 261 TAGTCAGATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGG 320
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
||||| || || ||||| || ||||| ||||||| || | || |||||| || |||
Sbjct 321 TCAGGTGGAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAA 380
Query 193305 GA 193306
||
Sbjct 381 GA 382
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899627635281600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |