Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq333 255 9e-63 seq1836 158 2e-33 seq481 145 1e-29 seq221 131 2e-25 >seq333 Length=169781 Score = 255 bits (282), Expect = 9e-63 Identities = 569/842 (68%), Gaps = 32/842 (4%) Strand=Plus/Plus Query 17879 ACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAATTCATAAAATCAAAT 17938 ||| | || || |||||||| ||||| || | || || || | ||| ||||||||| Sbjct 13679 ACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAAGGAAATATTCTCCATGAAATCAAAT 13738 Query 17939 GGATTAGTGGTTTTATAATATTTTTCTTGTATTA----ATTCGTATAATAATCTATCTGC 17994 |||||||| ||||| || || ||| |||| | | ||||||||||| || Sbjct 13739 GGATTAGTTACATTATA-TACCTT-CTT--ATTACCAAAAGCAACCAATAATCTATCAGC 13794 Query 17995 TACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTAGTAGTCTGAAAGGTAG 18054 |||||| || |||||||| |||| || | | |||||||||| | || | |||| Sbjct 13795 TACAAACTCAACATATTGACACATTAATCCCGAGTTCATACCTAACAAACTAACTGGTAA 13854 Query 18055 AGCATCAATAATAAATTCTTTCTCTATCTCAACAGACTCTTTTATTATGTTTATTACC-- 18112 ||||||| | | | |||| || || || |||||| || || || || || Sbjct 13855 AGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTCAACAATAATTCTTTGCACGAT 13914 Query 18113 --CTAGATTTTGGCAATTTATTAATTATGTGATTATAATATAATAAACACGCAAAATCAG 18170 || ||| | | ||| |||| ||| | |||| ||| || |||||||||| Sbjct 13915 TTCTGGATCAGGTCTATTCTTTAA--ATGGGCAAATAACATA-----CAAGCAAAATCAG 13967 Query 18171 TGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTTAACCCGGGCATTATAC 18230 | ||||| ||||||||||| || |||||||| ||| || ||||| || ||||||| | Sbjct 13968 TATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCCTGGCATTAATC 14027 Query 18231 CTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAGAATATACCCTCAAC-G 18289 ||||||| |||| ||| || ||||| || || | | |||||| ||||| |||| | Sbjct 14028 CTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAATACCTTCAATAG 14087 Query 18290 CACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTAT--TTATTGCTCAGTATCCATTTT 18346 || || || || | ||||||||||||| | | | || |||| | | ||||||| Sbjct 14088 CA-GCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATCGGCGA---TCCATTTC 14143 Query 18347 TGTGCCCA-TTCTCCTTNNNNNNNNATACACGGTATACTCTCTATAGCATTAAACAAATC 18405 ||||| || |||| ||||| || ||| | | || |||| ||| ||| Sbjct 14144 AAAGCCCAGTTGGCCTTCTTGGCA-ATACATGGAATAGTATGAATTGCATCAAATAAAAA 14202 Query 18406 ATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATG 18465 || ||||| | ||| || | |||||| || || || | |||||| | ||||||||| Sbjct 14203 TTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGAATAAACTTCAGAATG 14262 Query 18466 TATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTC 18525 || |||| || || || |||| ||| || | | |||| || ||| ||||| || Sbjct 14263 AATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCAGGAACTTGAACTTC 14322 Query 18526 GCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGC 18585 | | || |||| || ||||| |||||||||||||| |||| || || || || || Sbjct 14323 AGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGCAGCAAAGAAGGC 14382 Query 18586 CAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATTGTTCCATTCATCTAT 18642 || || |||||||| ||||||||| || | ||||||||| || | || Sbjct 14383 TAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTGTTCCAATCGTGTAA 14442 Query 18643 ATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCTGTTTGTACAT 18702 ||| || || ||| | |||||| | ||||| || || | ||| || | ||| ||||| Sbjct 14443 ATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCAGCTTTTTTATACAT 14502 Query 18703 TT 18704 || Sbjct 14503 TT 14504 >seq1836 Length=79629 Score = 158 bits (174), Expect = 2e-33 Identities = 174/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || |||| || || ||||| || |||||||| |||||||| ||| |||| Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||||| || ||||| ||||| || ||||| || || ||||| ||| Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAA 57226 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||||||||||||| | ||||| ||||||||||| || || | Sbjct 57225 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACA-- 57168 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | ||||||| || | || | || || || || ||||| ||||| ||| Sbjct 57167 ACATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGGT 57118 Score = 149 bits (164), Expect = 9e-31 Identities = 172/230 (75%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || |||| || || ||||| || |||||||| |||||||| ||| |||| Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| || || ||| ||| || ||||| || ||||| || || || || ||| Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 |||||||| |||| ||| |||||||| | ||||| ||||||||||| ||||| | Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGATTACA-- 56940 Query 156003 ATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 ||||||||| || | || | || || || |||||||| ||||| ||| Sbjct 56939 ATATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGGT 56890 >seq481 Length=384 Score = 145 bits (160), Expect = 1e-29 Identities = 146/189 (77%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || |||| || || ||||| || |||||||| |||||||| ||| |||| Sbjct 208 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 149 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| ||||| || ||||| ||||| || ||||| || || || || ||| Sbjct 148 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 89 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||||||||||||| ||||||||||||| | ||||| ||||||||||| || || | Sbjct 88 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACA-- 31 Query 156003 ATATCCAAA 156011 | ||||||| Sbjct 30 ACATCCAAA 22 Score = 105 bits (116), Expect = 1e-17 Identities = 129/174 (74%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938 |||||| | |||| ||||| || ||||| ||||| || ||||| || || || || Sbjct 380 TTCTGACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCTGA 321 Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998 |||||||||||||||| ||||||||||||| | ||||| ||||||||||| || || Sbjct 320 CCAACAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTA 261 Query 155999 TAATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | | ||||||| || | || | || || || || ||||| ||||| ||| Sbjct 260 CA--ACATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGGT 209 >seq221 Length=38424 Score = 131 bits (144), Expect = 2e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 ||||||||||| || |||| || || ||||| || || ||||| || ||||||||| Sbjct 37883 AAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCC 37824 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 || || | ||| || || ||| || || |||||||| ||||| || || || || Sbjct 37823 TCCGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGAT 37764 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||||||||| || | ||| ||||| || | |||||| ||||| ||| ||||| Sbjct 37763 CAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTAC 37704 Query 156000 AATATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 ||||| ||||| | || | ||||| || || ||||||||||| |||| Sbjct 37703 AATATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGGTG 37652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731850226808000