Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq333 239 9e-58
seq221 201 2e-46
seq1836 168 1e-36
seq481 123 5e-23
>seq333
Length=169781
Score = 239 bits (264), Expect = 9e-58
Identities = 568/857 (66%), Gaps = 20/857 (2%)
Strand=Plus/Plus
Query 49592 CATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAATA 49650
||| |||||||||||||| | |||||| || || | || ||| | || ||||
Sbjct 13726 CATGAAATCAAATGGATTAGTTACATTATA-TACCTTCTTATTACCAAAAGCAACCAATA 13784
Query 49651 ATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAATT 49710
||||||| |||||||| ||||||||||| |||||||| | | |||||||| || ||
Sbjct 13785 ATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCATACCTAACAAAC 13844
Query 49711 TAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatca 49770
||| |||||| |||||| | | |||| ||||| || | ||||||| ||| ||
Sbjct 13845 TAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTCAACAATAATTC 13904
Query 49771 taattatattattttttgataatttatatttaatatgattcgcatatattaaACATGCAA 49830
| || | |||| | ||| | | |||| || || ||| ||| | ||| ||||
Sbjct 13905 T--TTGCACGATTTCTGGATCAGGTCTATTCTTTAA-ATGGGCAAATAACATACAAGCAA 13961
Query 49831 AATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCA 49890
||||||||||||| || || || || || || ||||||||| ||||||||||||||||
Sbjct 13962 AATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCCTGGCA 14021
Query 49891 TTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCT 49950
|||||||||| || || | ||| || || || ||||| | | |||||| ||||| |
Sbjct 14022 TTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAATACCTT 14081
Query 49951 CGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---ATCTAATATCC 50007
| | | ||||| || | || |||| | || | ||| ||| ||| ||||
Sbjct 14082 CAATAGCAGCAAAGGCAACTAATCTTTCAGCATA---TAAGGCATCCTTATCGGCGATCC 14138
Query 50008 AATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT- 50066
| || | |||||| | || || || ||| | || ||| | | || || | ||||
Sbjct 14139 ATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCATCAAATA 14198
Query 50067 --AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTT 50124
|||||| || || | || || | |||||| | ||
Sbjct 14199 AAAATTCAGCTTCTTGA---GGATCCTTAACATAAGTATCTATCAAAAGAGAATAAACTT 14255
Query 50125 CAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACT 50184
||||||| | ||| || ||||| || ||| ||| | | ||||| | | |
Sbjct 14256 CAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCAGGAACTT 14315
Query 50185 GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGA 50244
||||||| | | |||| ||| |||||||| ||| || ||||||||||| || || |
Sbjct 14316 GAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGCAGCAA 14375
Query 50245 AGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCCAAG 50301
|||| ||||| || ||| |||| ||||||||| || || ||| | ||||
Sbjct 14376 AGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTGTTCCAAT 14435
Query 50302 ATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTT 50361
| | ||| || |||||| | |||||| ||||| ||||| ||| | | |||||
Sbjct 14436 CGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCAGCTTTTT 14495
Query 50362 TATACATTTGATATATATCAAAATGTTCAATGGGAAATAGTACATATCGTTTAGTAtttt 50421
|||||||||| |||| ||| || | ||| || |||| ||| ||| | | | ||| |
Sbjct 14496 TATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCTTCTTGCATTCT 14555
Query 50422 tttCTAATATCGGTTCT 50438
| |||| ||||||
Sbjct 14556 CCTTCAATAATGGTTCT 14572
>seq221
Length=38424
Score = 201 bits (222), Expect = 2e-46
Identities = 183/231 (79%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | || || ||||||||||||| ||||| |||||| ||||||
Sbjct 37653 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACT 37712
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| |||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 37713 TAAGGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 37772
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| |||||||| || || ||| |||||| || | || || ||||| ||
Sbjct 37773 AATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGAC 37832
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539
||| | ||||||||| ||||||||||| || |||| || || ||||||||
Sbjct 37833 TTCCAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATTTT 37883
>seq1836
Length=79629
Score = 168 bits (186), Expect = 1e-36
Identities = 174/228 (76%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGA 192368
||||||||| | | ||| || || |||||||||| || || |||||| ||||||||
Sbjct 56890 ACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGA 56949
Query 192369 TAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGG 192428
||| |||| | || || ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct 56950 TAAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGG 57009
Query 192429 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTAC 192488
|| ||||| || ||||| || ||| ||| ||||| || | || || ||||| ||
Sbjct 57010 AATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAAC 57069
Query 192489 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| ||||| || ||||||||||| || |||| || || |||||
Sbjct 57070 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117
Score = 131 bits (144), Expect = 3e-25
Identities = 167/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || || |||||||| | || || ||| || || |||
Sbjct 57116 ATACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 57175
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
||||| |||| | || || || || ||||| ||||| || ||||| ||||| || |||
Sbjct 57176 GATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGT 57235
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| || || || |||| || || |||||
Sbjct 57236 GGAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCA 57295
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||||| ||||| || ||||||||||| || |||| || || |||||
Sbjct 57296 ACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345
>seq481
Length=384
Score = 123 bits (136), Expect = 5e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 192331 AAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAAT 192390
|| |||||||| | || || ||| || || |||||||| |||| | || || ||
Sbjct 3 AAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAAC 62
Query 192391 TGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATT 192450
|| ||||| ||||| || ||||| ||||| |||||||| || ||||| || ||||| |||
Sbjct 63 TGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATT 122
Query 192451 TTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 192510
|| || || || |||| || || ||||| ||||||| ||||| || ||||||
Sbjct 123 TTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCA 182
Query 192511 GTTAATGTTTTAATAAATATCTGCAT 192536
||||| || |||| || || |||||
Sbjct 183 GTTAAAGTCTTAACGAAGATTTGCAT 208
Score = 96.9 bits (106), Expect = 7e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| | | || || || |||||||| | || || ||| || || |||
Sbjct 207 ATACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 266
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
||||| |||| | || || || || ||||| ||||| || ||||| ||||| ||||||
Sbjct 267 GATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGT 326
Query 192427 GGTATTCCTTCTTTATCTTGTATTTT 192452
|| || ||||| || ||||| |||||
Sbjct 327 GGAATACCTTCCTTGTCTTGGATTTT 352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984449979513000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |