Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq333 215 9e-51 seq221 188 1e-42 seq1836 187 5e-42 seq481 138 2e-27 >seq333 Length=169781 Score = 215 bits (238), Expect = 9e-51 Identities = 595/916 (65%), Gaps = 16/916 (2%) Strand=Plus/Plus Query 38833 TTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAAT 38892 |||| || || |||||| | ||||| || || || || || || |||| || || | Sbjct 13665 TTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAAGGAAATATTCT 13724 Query 38893 TCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATA-CATATAAT 38951 ||| |||||||||||||| | |||||| || || | || ||| | || ||| Sbjct 13725 CCATGAAATCAAATGGATTAGTTACATTATA-TACCTTCTTATTACCAAAAGCAACCAAT 13783 Query 38952 AATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATAAT 39011 |||||||| || ||||| ||||||||||| |||||||| | | |||||||| || || Sbjct 13784 AATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCATACCTAACAAA 13843 Query 39012 TTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatc 39071 ||| |||||| |||||| | | |||| ||||| || | ||||||| ||| || Sbjct 13844 CTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTTCAACAATAATT 13903 Query 39072 ataattatattattttttgataatttatatttaatatgattcgcatataGTAAACATGCA 39131 | || | |||| | ||| | | |||| || || ||| ||| | ||| ||| Sbjct 13904 CT--TTGCACGATTTCTGGATCAGGTCTATTCTTTAA-ATGGGCAAATAACATACAAGCA 13960 Query 39132 AAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGC 39191 ||||| |||||||| ||||| || || || || ||||||||| ||||||||||||||| Sbjct 13961 AAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTTAATCCTGGC 14020 Query 39192 ATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCC 39251 ||||||||||| || || | ||| || || || ||||| | | |||||| ||||| Sbjct 14021 ATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAGAAAATACCT 14080 Query 39252 TCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATC---ATCTAAAATC 39308 || | | ||||| || | || |||| | || | ||| ||| ||| ||| Sbjct 14081 TCAATAGCAGCAAAGGCAACTAATCTTTCAGCATA---TAAGGCATCCTTATCGGCGATC 14137 Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368 || || | ||||| | || || || ||| | || ||| | | || || | |||| Sbjct 14138 CATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCATCAAAT 14197 Query 39369 AATTCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAATACATTTCA 39428 || | |||||| | |||| Sbjct 14198 AAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGAGAATAAACTTCA 14257 Query 39429 GAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTT-GCTTCTGAATACTG 39487 ||||| | ||| || ||||| || ||| || ||| || ||||| | | || Sbjct 14258 GAATGAATCATTTCAATCATGATTTGGAAACCATAGAA-TGCTTTAGCTTCAGGAACTTG 14316 Query 39488 AACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAA 39547 |||||| | | |||| ||| |||||||| ||| || ||||||||||| || || || Sbjct 14317 AACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAAGCAGCAAA 14376 Query 39548 GAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAA---ATTTTCCCAAGA 39604 ||| ||||| || ||| |||| ||||||||| || || ||| | |||| Sbjct 14377 GAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTGTTCCAATC 14436 Query 39605 TTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAAAGATGCTACGGATTTTTT 39664 | | ||| || |||||| | |||||| ||||| || || ||| | | |||||| Sbjct 14437 GTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCAGCTTTTTT 14496 Query 39665 ATACATTTGATATATATCAAAATGTTCAATGGGAAATAACACATATCGTTTAGTAttttt 39724 ||||||||| |||| ||| || | ||| || |||| ||| ||| | | | ||| | Sbjct 14497 ATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCTTCTTGCATTCTC 14556 Query 39725 ttCTAATATCGGTTCT 39740 | |||| |||||| Sbjct 14557 CTTCAATAATGGTTCT 14572 >seq221 Length=38424 Score = 188 bits (208), Expect = 1e-42 Identities = 185/239 (77%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893 ||| || ||||||||| | || || || ||||||||||||| ||||| ||||| Sbjct 37645 TTCTTACCACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTG 37704 Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953 ||||| ||| | || | || |||||||||||||||||||| |||||||| ||||| Sbjct 37705 TAATCACTTAAGGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGA 37764 Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013 |||||||| || ||||| |||||||| || || ||| |||||| || || || || Sbjct 37765 TCAGGTGGAATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAG 37824 Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| ||||| | ||||||||| ||||||||||| || |||| ||| || |||||||| Sbjct 37825 GATTCGACTTCCAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATTTT 37883 >seq1836 Length=79629 Score = 187 bits (206), Expect = 5e-42 Identities = 178/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 ||||||||| | || ||| || || |||||||||| || || ||||| ||||| || Sbjct 56890 ACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGA 56949 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 ||||| || |||| || ||||| |||||||||||||||||||| |||||||||||||| Sbjct 56950 TAAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGG 57009 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| || ||||| || ||| ||| ||||| || || || || ||||| || Sbjct 57010 AATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAAC 57069 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| ||||| || ||||||||||| || |||| ||| || ||||| Sbjct 57070 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || || |||||||| | || || || || || || Sbjct 57116 ATACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 57175 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || |||| || || || ||||| |||||||| ||||| |||||||| ||| Sbjct 57176 GATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGT 57235 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| || || || ||||| || || ||||| Sbjct 57236 GGAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCA 57295 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||||| ||||| || ||||||||||| || |||| ||| || ||||| Sbjct 57296 ACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 >seq481 Length=384 Score = 138 bits (152), Expect = 2e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171864 AAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAAT 171923 || |||||||| | || || || || || || ||||||| || |||| || || Sbjct 3 AAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAAC 62 Query 171924 TGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATT 171983 || ||||| |||||||| ||||| |||||||||||||| || ||||| || ||||| ||| Sbjct 63 TGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATT 122 Query 171984 TTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCA 172043 || || || || ||||| || || ||||| ||||||| ||||| || |||||| Sbjct 123 TTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCA 182 Query 172044 GTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || |||| ||| || ||||| Sbjct 183 GTTAAAGTCTTAACGAAGATTTGCAT 208 Score = 105 bits (116), Expect = 1e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 ||||||||||| | || || || || |||||||| | || || || || || || Sbjct 207 ATACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCA 266 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 ||||||| || |||| || || || ||||| |||||||| ||||| |||||||||||| Sbjct 267 GATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGT 326 Query 171960 GGTATTCCTTCTTTATCTTGTATTTT 171985 || || ||||| || ||||| ||||| Sbjct 327 GGAATACCTTCCTTGTCTTGGATTTT 352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905109072204000