Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq333 158 4e-33 seq1891 105 2e-17 seq2235 100 8e-16 seq1758 91.5 4e-13 seq88 91.5 4e-13 seq2146 84.2 6e-11 >seq333 Length=169781 Score = 158 bits (174), Expect = 4e-33 Identities = 219/307 (71%), Gaps = 0/307 (0%) Strand=Plus/Plus Query 156060 TTGCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 || ||||| ||||| ||||| ||||| || || ||||| || | | ||| || |||||| Sbjct 50810 TTACCACCTTGATCAACATAACGAGCCGTGTTGTTGAAAACTCTAACCATGGGGATAATA 50869 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATA 156179 || |||||||| |||||||| || ||||| ||||||| | || | |||||||||| Sbjct 50870 CCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCCCGGATATTATGAATA 50929 Query 156180 TGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAA 156239 |||| ||||||||||| | | || |||||| ||| || ||||| || | | || Sbjct 50930 TGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTCTTTAACGTGTCGTAA 50989 Query 156240 ATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGGTCGT 156299 ||||| ||||| ||||| || | ||| | | | | |||||| | ||| || | | Sbjct 50990 ATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACGAAGACATTTGTGGACTT 51049 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 || || ||||| ||||||| || || | |||| |||| || || | |||||| || Sbjct 51050 GGAGTACCAGCATTGAATAACGTGGGGGACCCATGGGTAAAGTATTTTTGAGACATTAAA 51109 Query 156360 TCGTATG 156366 | |||| Sbjct 51110 TTATATG 51116 Score = 105 bits (116), Expect = 2e-17 Identities = 385/593 (65%), Gaps = 15/593 (3%) Strand=Plus/Minus Query 133073 AGGTTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAA 133132 || |||||||| |||||||||| | | || || ||||| |||||||||||| || Sbjct 14544 AGATTTGTTATATTCCCAATTAGATATCATGAAATATGGCAAATGTATAAAAAAGCTGAA 14485 Query 133133 GATTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGA--AG 133190 | || ||| ||||| | ||| | |||||| || || | | | ||| | | Sbjct 14484 GCTTCATTCTGGACCGCTGAAGAAATCGATTTAAGTAAGGATTTACACGATTGGAACAAT 14425 Query 133191 CCCTT-ACTGGGGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGT 133249 || | || ||||| |||| ||||| | ||||| || |||||||| | Sbjct 14424 AGATTGAATGATAATGAACGTTATTTCATTTCCCGAGTATTAGCCTTCTTTGCTGCTTCT 14365 Query 133250 GATGGTATTGTTCTTGAAAATTTA--GGAACACGGTTTATG-GGAGAAGTTCAACTGGCC 133306 |||||||| ||| |||||||||| |||| | ||| || | ||||||||| | | Sbjct 14364 GATGGTATAGTTAATGAAAATTTAGTGGAAAA---TTTCTGTGCTGAAGTTCAAGTTCCT 14308 Query 133307 GAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATAT 133366 ||||| || || ||||| | || || ||| |||| || |||||| ||| Sbjct 14307 GAAGCTAAAGCATTCTATGGTTTCCAAATCATGATTGAAATGATTCATTCTGAAGTTTAT 14248 Query 133367 TCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAA--ACTATTCAACG 133424 ||| | | || |||||||| | || ||| | || |||||| || |||| | | Sbjct 14247 TCTCTTTTGATAGATACTTATGTTAAGGAT--CCTCAAGAAGCTGAATTTTTATTTGATG 14190 Query 133425 CCATTAGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGG 133484 | ||| |||| |||||| ||||| | |||||||| | ||||||||| | Sbjct 14189 CAATTCATACTATTCCATGTATTGCCAAGAAGGCCAACTGGGCTTTGAAATGGATCGCCG 14130 Query 133485 ACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttt 133544 | ||| ||| | |||| | | ||||| ||||||| | || || ||||| | Sbjct 14129 ATAAGGATGCCTTATATGCTGAAAGATTAGTTGCCTTTGCTGCTATTGAAGGTATTTTCT 14070 Query 133545 tCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTG 133603 | ||||| | || ||| || ||||| ||| | || || | || | | || ||| | Sbjct 14069 TTAGTGGATCCTT-TGCTTCGATTTTCTGGTTAAAGAAAAGAGGATTAATGCCAGGATTA 14011 Query 133604 TGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGC 133656 ||| ||||| ||| | |||||||| || || | | | || || || ||||| Sbjct 14010 ACTTTCTCTAATGAATTAATTTCAAGAGATGAAGGATTACATACTGATTTTGC 13958 >seq1891 Length=76648 Score = 105 bits (116), Expect = 2e-17 Identities = 482/756 (64%), Gaps = 29/756 (4%) Strand=Plus/Plus Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 |||| | ||| ||||| || || || || || || | ||||||||||| || ||| Sbjct 36815 TATTGAATAATTTCACAACAAAGATTTGACGATTTTATAGGACCTAAATTCTTTTGATTA 36874 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 || ||| | ||||||||||| || ||||| || ||||| | || || || | |||| Sbjct 36875 GACTTAATATTACAAGCATCTTTATATAGCATATATGGAATCCCCGTTTCAGTTTGTGAT 36934 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCC-----TT 155805 || | || || ||| | | | | || |||| || | || |||| || Sbjct 36935 TCTAATATTGCTAACCATAACTTATGAGCCTTAACC-----GTAGAATATGCCAATCCTT 36989 Query 155806 CCGACTCATATTTCATATACAGCGTTCGGTAA--TCCTCACCGTAACAATCACTCAGTCC 155863 | |||||||| ||||| ||| || || || || || |||||| | || Sbjct 36990 GCTGTTCATATTTTTCATACAA--TTCAACAAACTCGTCCCCATACACATCACTTAACCC 37047 Query 155864 AGGGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAA 155923 ||| | || |||| |||||| ||| ||||| | | || || | |||||| Sbjct 37048 AGGAGCTTCATTGGGGGAAAACAAACTCCAGTCTTTATCTTCTTTAACTCGTTTCATAAA 37107 Query 155924 TACATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCCGT 155982 | |||| ||| | |||| || | || || | || || |||||||| |||| Sbjct 37108 CAAATCAGGTATCCATAACCCATAAAACAAATCTCTAGTTCTATG-CTCCTCATTACCGT 37166 Query 155983 GATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAG 156042 | |||||||| | ||||| | || ||||||| ||| || || | |||||| | Sbjct 37167 GGTTCTTCCGCATTTCTAAAATATCAAAGATATCAGCATGCCAAGGTTCTATATACATTG 37226 Query 156043 CAAAACTACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGA 156099 |||| ||| || || ||||| ||||||||||||| ||||| ||||| || | Sbjct 37227 AAAAAGCCCCAGGTCTTTTACCACCGCCTTGATCTACATACCTGGCAGTATTATTAAATA 37286 Query 156100 CACCTAGCATAGGAA-TAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCA 156158 ||| || ||| |||| |||| || |||||| ||||| || || |||| | || Sbjct 37287 CACGTAACATGGGAACTAAT-CCGTTGGAAACTCCATTCGTACCTGCAATAAATGTTCCG 37345 Query 156159 GATGAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCG 156218 | | | || ||| ||||||| || || || ||||| ||| || ||| || Sbjct 37346 TTGGCCCTTATATCATGCATATGTATACCGATCCCCCCTGATGCTTTCGAGATTAATGCT 37405 Query 156219 CATTCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAG 156278 || | | || ||| | || || || |||||||| || | ||| | || || | Sbjct 37406 GCCTCATGAAGGGTTTTGTAGATTCCATCTATAGAATCTTCCTTCATAGCTAAAAGGAAA 37465 Query 156279 CACGA----ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATG 156334 || || | ||||||| || ||||| | ||| ||| || || | ||||| Sbjct 37466 CATGACGACAAATAATTGAATTC----CGTTCCGGAATTGTATAACGTGGGAGAAGCATG 37521 Query 156335 AATAAAATACTTATTAGACATATAATCGTATGTCTC 156370 |||| ||| || | ||||| | || |||||||| Sbjct 37522 TATAAGATATTTTTGGGACATCAAGTCATATGTCTC 37557 >seq2235 Length=55310 Score = 100 bits (110), Expect = 8e-16 Identities = 230/341 (67%), Gaps = 4/341 (1%) Strand=Plus/Plus Query 289026 TTTACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAAT 289085 |||||||| |||||||||||| |||| || | | | | || | ||||| || ||| | Sbjct 20252 TTTACCAATAGCATCAATTTCATCAACAAATACAATAGATGGCGCATTTTCTCGGGCAGT 20311 Query 289086 TGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGA 289145 ||||| || | || | || || | |||||| |||| || ||||||||||| Sbjct 20312 CTTGAATAAATCACGAACTCTACTGGCACCTACCCCAACAAACATCTCAACAAATTCAGA 20371 Query 289146 AGCGGATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 | | || || |||| |||| ||| ||||| ||||| ||| |||| | ||| | Sbjct 20372 ACCAGAAAC-AGAATAAAATGGTACCCCAGCTTCACCTGCAGTGGCCTTCGCGATAAGAG 20430 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAG 289264 | ||||| || || || || ||| | | | | || || | ||||||||| Sbjct 20431 TTTTACCAGTACCGGGAGGACCCGAGAGAATAGCCCCACGAGGAATTTTTGCCCCTAATT 20490 Query 289265 ACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCT 289324 | |||||| || || | |||||||||| |||| |||| || ||| | ||| || | Sbjct 20491 TTTCATATTTTTCGGGATTTTTTAAAAATTTAACAAATTCCATAACTTCTTGTTTAGCTT 20550 Query 289325 CATCACAT-CCTGCTACATCAGCAAAAGTAATATTAATATC 289364 |||| ||| ||||| ||||| |||| | | ||||| ||| Sbjct 20551 CATC-CATACCTGCAACATCTTTAAAACTTAAATTAACATC 20590 >seq1758 Length=94611 Score = 91.5 bits (100), Expect = 4e-13 Identities = 158/227 (70%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 289120 CCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCG 289179 ||||| || | ||| |||| || || |||| | || ||||| || ||||| Sbjct 22076 CCAACGTAAAGTTCATCAAACTCCGACCCGGACATGAAAAAGAATGGAACTCCAGCTTCC 22135 Query 289180 CCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACT 289239 ||||| || | || ||||| ||||||||||||||||| || || |||| ||| Sbjct 22136 CCTGCAGTGGCTCGGGCAAGAAGAGTCTTACCTGTTCCAGGAGGACCAGTCAATAAAACG 22195 Query 289240 CCCTTTGGTACTTTTGCCCCAGC-AGAC--TTATATTTCTCAGGGCTCTTTAAAAATTCT 289296 || || |||| ||| |||| | | || || ||||| ||| ||| || || || Sbjct 22196 CCTTTAGGTAATTT---CCCACCTAAACCAGTAAATTTCGAAGGATCCTTCAAGAAATCA 22252 Query 289297 ACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 |||||||| ||||||||| | ||||||||||||| ||| ||||| Sbjct 22253 ACAATTTCTTCAAGTTCAGCTCTTGCCTCATCACACCCTTGAACATC 22299 >seq88 Length=45284 Score = 91.5 bits (100), Expect = 4e-13 Identities = 217/326 (67%), Gaps = 4/326 (1%) Strand=Plus/Minus Query 302553 ATCATAACCAATCATAATGTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGT 302612 ||||||| || |||||| ||||||| ||| | ||||||||| |||||||| ||||| Sbjct 20464 ATCATAATGAACCATAATATCTTCCAAGGCCTTAACTAAACGACGTTGAATATACCCAGT 20405 Query 302613 TGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAA 302672 | | |||||| || || |||||||| | || | | |||| ||||||||||||| || Sbjct 20404 TTCTGCTGTTTTCACCGCGGTATCAATCAACCCTTCTCTACCAGCCATAGCATGGAAAAA 20345 Query 302673 TAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG 302732 | || | || || || | | | | || | || || || || || ||| || Sbjct 20344 GAATTCCTGAGGAGTTAATCCTCGTAAATATGAATTTTCCACAAACCCTTTCGACTCAGG 20285 Query 302733 CGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACG 302792 |||| || ||| || || || |||| | || | || | || |||| || | Sbjct 20284 TGAATAATCATCCTTAGTGAAATGAGGCAACGATCTATCGGCAAACCCAAATGGAATTCT 20225 Query 302793 CTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAATCATCTGCGAAATATT--TAAATCA 302850 ||| || || || | || || || | || | ||| || |||||||| ||||| | Sbjct 20224 CTTACCTTCCACAATTTGTTGACCTACACAAGCCGACATTTGAGAAATATTAATAAATGA 20165 Query 302851 CTGCCCTTGGAGCCAGCATTTACCAT 302876 |||||||| |||| | | ||||| Sbjct 20164 --ACCCTTGGACCCAGAAGTAACCAT 20141 Score = 89.7 bits (98), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 3/140 (2%) Strand=Plus/Minus Query 301813 AGAATTTCTTCAATACGGGGAACACCACGGGTTACGTTAGACTTGGACGCAACACCAGCA 301872 |||||||| | || ||| ||||| || || || || || || | ||| || ||| Sbjct 21222 AGAATTTCCTTAAGACGAGGAACCCCCAATGTAACATTT---TTCGAAGAAACCCCGGCA 21166 Query 301873 AAGTGGAAAGTATTCAGAGTTAATTGAGTAGTTGGCTCACCAATACTTTGTGCCGCAATC 301932 | ||||||||||||| || | |||||||| ||| ||||||||| ||| || |||| Sbjct 21165 TAATGGAAAGTATTCAATGTCATTTGAGTAGCTGGTTCACCAATAGATTGAGCGGCAACA 21106 Query 301933 ATACCAACCATTTCTCCTGG 301952 | |||||||||||| ||||| Sbjct 21105 ACACCAACCATTTCACCTGG 21086 >seq2146 Length=59407 Score = 84.2 bits (92), Expect = 6e-11 Identities = 155/221 (70%), Gaps = 5/221 (2%) Strand=Plus/Plus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||||| ||||||||||| |||| |||||| | ||| | || ||| || ||| | Sbjct 11274 ACCAATGGCATCAATTTCATCAAAGAAAATAATACATGCTTTTTTAGTTCTTGCCATTTC 11333 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 ||||||||||| || ||| || ||||||||| ||| || ||||||||| | Sbjct 11334 AAATAATTCTCGAACCATTCTTGCACCTTCACCAACATATTTTTGAACTAATTCAGAACC 11393 Query 289149 GGATACTTGAATGAATGTTACATTTGCTTCGCCT-GCTACTGCCCTCGC-CAGAAGTGTC 289206 |||| |||| ||||| ||| | ||| | || || || || || || || ||| Sbjct 11394 AATTACTCGAATAAATGTAGCATCAG-TTCTATTAGCAACGGCTCTGGCACATAA-AGTC 11451 Query 289207 TTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGG 289247 ||||| ||||| ||||| || | ||||| || |||| |||| Sbjct 11452 TTACCAGTTCCTGGTGGGCCATATAATA-AAATCCCCTTGG 11491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471772718762060