Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1221 140 4e-28 seq2080 82.4 1e-10 >seq1221 Length=135038 Score = 140 bits (154), Expect = 4e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460 |||||||||||| || || ||||| |||||| | |||| ||||| ||| | |||||| Sbjct 40513 GAACTTTTATGGTTTGTTTCTGGTTCCACTGATGCTAAACTATTAAGTGACAAGGGTGTT 40572 Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520 ||| | ||| | | || ||||| ||||||||||| ||| || || || ||| | | Sbjct 40573 AAAATCTGGGAGGGGAACGGTTCACGTGAATTTTTGGATAAATTGGGATTAACTCATCGT 40632 Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580 |||||||||||||| ||| |||||||||| |||||||||||| || || ||||| Sbjct 40633 CGTGAAGGTGATTTAGGACCAGTTTATGGATTCCAATGGAGACATTTCGGAGCCGAATAT 40692 Query 172581 ATCGACTGTGATACAGATTACACAGGACAAGG 172612 | || ||||||| || || || || || || Sbjct 40693 CTAGATTGTGATAGTGACTATACTGGTCAGGG 40724 >seq2080 Length=64058 Score = 82.4 bits (90), Expect = 1e-10 Identities = 139/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009 ||||| ||||||||||| || |||||| ||| | |||| |||| | ||||||||| Sbjct 27482 ATTAAAGTTGCTCAATTGGCAGGTTATGTTAGTGAAAACACAGGTTATCACCATGGTGAA 27423 Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 166069 ||| ||| | |||| || ||| |||| ||| |||| ||||| | ||||| || Sbjct 27422 CAATCCTTAATTCAAACAATTATTGGTCTTGCTCAAAATTTCGTTGGATCGAATAACAT- 27364 Query 166070 GCATTA-CTTGAA-CCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 166127 || || ||| || || ||||| |||||| | | | || |||||||||| | Sbjct 27363 -CAATATCTTAAAGCCAAATGGTTCCTTTGGTTCTCGTGCTGCTGGTGGTAAAGATTATT 27305 Query 166128 CTGCATCAAGATATATTT 166145 |||| | |||||||||| Sbjct 27304 CTGCTGCGAGATATATTT 27287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632470783434400