Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq1221 140 4e-28
seq2080 82.4 1e-10
>seq1221
Length=135038
Score = 140 bits (154), Expect = 4e-28
Identities = 158/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 172401 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 172460
|||||||||||| || || ||||| |||||| | |||| ||||| ||| | ||||||
Sbjct 40513 GAACTTTTATGGTTTGTTTCTGGTTCCACTGATGCTAAACTATTAAGTGACAAGGGTGTT 40572
Query 172461 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 172520
||| | ||| | | || ||||| ||||||||||| ||| || || || ||| | |
Sbjct 40573 AAAATCTGGGAGGGGAACGGTTCACGTGAATTTTTGGATAAATTGGGATTAACTCATCGT 40632
Query 172521 AAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 172580
|||||||||||||| ||| |||||||||| |||||||||||| || || |||||
Sbjct 40633 CGTGAAGGTGATTTAGGACCAGTTTATGGATTCCAATGGAGACATTTCGGAGCCGAATAT 40692
Query 172581 ATCGACTGTGATACAGATTACACAGGACAAGG 172612
| || ||||||| || || || || || ||
Sbjct 40693 CTAGATTGTGATAGTGACTATACTGGTCAGGG 40724
>seq2080
Length=64058
Score = 82.4 bits (90), Expect = 1e-10
Identities = 139/198 (70%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 165950 ATTAAGGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAGCATGGTGAA 166009
||||| ||||||||||| || |||||| ||| | |||| |||| | |||||||||
Sbjct 27482 ATTAAAGTTGCTCAATTGGCAGGTTATGTTAGTGAAAACACAGGTTATCACCATGGTGAA 27423
Query 166010 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 166069
||| ||| | |||| || ||| |||| ||| |||| ||||| | ||||| ||
Sbjct 27422 CAATCCTTAATTCAAACAATTATTGGTCTTGCTCAAAATTTCGTTGGATCGAATAACAT- 27364
Query 166070 GCATTA-CTTGAA-CCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 166127
|| || ||| || || ||||| |||||| | | | || |||||||||| |
Sbjct 27363 -CAATATCTTAAAGCCAAATGGTTCCTTTGGTTCTCGTGCTGCTGGTGGTAAAGATTATT 27305
Query 166128 CTGCATCAAGATATATTT 166145
|||| | ||||||||||
Sbjct 27304 CTGCTGCGAGATATATTT 27287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632470783434400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |