Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq1836 134 1e-26 seq481 122 8e-23 >seq1836 Length=79629 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || |||| ||||| |||||||| | ||||| ||| | | Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||||||||| ||||| || || || || || Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAA-ATCCAAGACAAGGAAGGTATTCCACCAGACCA 57227 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||| |||||||| || ||| | || || |||| | || || || || Sbjct 57226 ACAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAA 57167 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||||||||| || |||||||||| ||| ||||| | || || Sbjct 57166 CATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 57119 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || |||| ||||| |||||||| | ||||| ||| | | Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||||||||| ||||| || || || || ||| Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | || || ||||| || || || | || || |||| | || ||||| || Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGATTACAAT 56938 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || ||||||||||| || |||||||||| || ||||| | || || Sbjct 56937 ATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGG 56891 >seq481 Length=384 Score = 122 bits (134), Expect = 8e-23 Identities = 154/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| |||| || |||| ||||| |||||||| | ||||| ||| | | Sbjct 208 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 149 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||||||||| ||||| || || || || || Sbjct 148 GACACTATTGACAACGTCAAGTCCAAA-ATCCAAGACAAGGAAGGTATTCCACCTGACCA 90 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 |||| | ||||| |||||||| || ||| | || || |||| | || || || || Sbjct 89 ACAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAA 30 Query 24883 CATTCAAAAGGAATCGACACTACACTTGG 24911 ||| ||||||||||| || ||||||||| Sbjct 29 CATCCAAAAGGAATCCACTTTACACTTGG 1 Score = 100 bits (110), Expect = 3e-16 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847 || ||||||||||| ||||| || || || || |||||| | ||||| |||||||| || Sbjct 352 AAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTTGCCGGTAAG 293 Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907 ||| | || || |||| | || || || ||||| ||||||||||| || ||||| Sbjct 292 CAGTTAGAAGACGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCCACTTTACAC 233 Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930 ||||| ||| ||||| | || || Sbjct 232 TTGGTTTTGAGATTGAGAGGTGG 210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449884215546400