Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1836 134 1e-26
seq481 122 8e-23
>seq1836
Length=79629
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| |||| || |||| ||||| |||||||| | ||||| ||| | |
Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||||||||| ||||| || || || || ||
Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAA-ATCCAAGACAAGGAAGGTATTCCACCAGACCA 57227
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||| |||||||| || ||| | || || |||| | || || || ||
Sbjct 57226 ACAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAA 57167
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| ||||||||||| || |||||||||| ||| ||||| | || ||
Sbjct 57166 CATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 57119
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| |||| || |||| ||||| |||||||| | ||||| ||| | |
Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || ||| |||||||||||||| ||||| || || || || |||
Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
||| | || || ||||| || || || | || || |||| | || ||||| ||
Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGATTACAAT 56938
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| ||||||||||| || |||||||||| || ||||| | || ||
Sbjct 56937 ATCCAAAAGGAATCTACTTTACACTTGGTTTTAAGATTGAGAGGTGG 56891
>seq481
Length=384
Score = 122 bits (134), Expect = 8e-23
Identities = 154/209 (74%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||| ||||| |||| || |||| ||||| |||||||| | ||||| ||| | |
Sbjct 208 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 149
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||||||||| ||||| || || || || ||
Sbjct 148 GACACTATTGACAACGTCAAGTCCAAA-ATCCAAGACAAGGAAGGTATTCCACCTGACCA 90
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|||| | ||||| |||||||| || ||| | || || |||| | || || || ||
Sbjct 89 ACAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAA 30
Query 24883 CATTCAAAAGGAATCGACACTACACTTGG 24911
||| ||||||||||| || |||||||||
Sbjct 29 CATCCAAAAGGAATCCACTTTACACTTGG 1
Score = 100 bits (110), Expect = 3e-16
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
|| ||||||||||| ||||| || || || || |||||| | ||||| |||||||| ||
Sbjct 352 AAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTTGCCGGTAAG 293
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||| | || || |||| | || || || ||||| ||||||||||| || |||||
Sbjct 292 CAGTTAGAAGACGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCCACTTTACAC 233
Query 24908 TTGGTGTTGCGATTGCGCGGAGG 24930
||||| ||| ||||| | || ||
Sbjct 232 TTGGTTTTGAGATTGAGAGGTGG 210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449884215546400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |