Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1836 89.7 4e-13 seq221 82.4 6e-11 >seq1836 Length=79629 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| || || || |||||||| || || || |||||| | ||| || || Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || || || || || || ||||| | || || || Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAA 57226 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | |||| ||| ||||| ||| | || |||| | ||| | | ||||||||| Sbjct 57225 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 57166 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || |||||||| || || || ||| |||| ||||||||| |||| || Sbjct 57165 ATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 57119 >seq221 Length=38424 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 |||||||||||||| || || || ||||| || || |||||||| | ||| || | Sbjct 37883 AAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCC 37824 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 ||| || | | | || ||| |||||| ||||| ||||| | || ||| Sbjct 37823 TCCGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGAT 37764 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || ||| | || | ||| |||||||| |||| || | | ||| | || ||| Sbjct 37763 CAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTAC 37704 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || ||||| || ||||| || || |||| |||||||| |||| || Sbjct 37703 AATATCCAAAAAGAATCTACTTTACATTTGGTTTTGAGATTAAGAGGTGG 37654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398865230079820