Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1221 134 2e-26 seq1913 84.2 3e-11 seq2080 82.4 1e-10 >seq1221 Length=135038 Score = 134 bits (148), Expect = 2e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 171613 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 171672 |||||||||||| || || ||||| |||||| | |||| ||||| ||| | |||||| Sbjct 40513 GAACTTTTATGGTTTGTTTCTGGTTCCACTGATGCTAAACTATTAAGTGACAAGGGTGTT 40572 Query 171673 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 171732 ||| | ||| | | || ||||| ||||||||||| ||| || || || ||| | | Sbjct 40573 AAAATCTGGGAGGGGAACGGTTCACGTGAATTTTTGGATAAATTGGGATTAACTCATCGT 40632 Query 171733 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 171792 |||||||||||||| ||| |||||||||| |||||||||||| || || ||||| Sbjct 40633 CGTGAAGGTGATTTAGGACCAGTTTATGGATTCCAATGGAGACATTTCGGAGCCGAATAT 40692 Query 171793 ATCGACTGTTATACAGATTACACAGGACAAGG 171824 | || ||| ||| || || || || || || Sbjct 40693 CTAGATTGTGATAGTGACTATACTGGTCAGGG 40724 >seq1913 Length=74342 Score = 84.2 bits (92), Expect = 3e-11 Identities = 48/49 (98%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 50438 CATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCA 50486 |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 15910 CATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCCCA 15862 >seq2080 Length=64058 Score = 82.4 bits (90), Expect = 1e-10 Identities = 139/198 (70%), Gaps = 4/198 (2%) Strand=Plus/Minus Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219 ||||||||||||||||| || |||||| ||| | |||| |||| | ||||||||| Sbjct 27482 ATTAAAGTTGCTCAATTGGCAGGTTATGTTAGTGAAAACACAGGTTATCACCATGGTGAA 27423 Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279 ||| ||| | |||| || ||| |||| ||| |||| ||||| | ||||| || Sbjct 27422 CAATCCTTAATTCAAACAATTATTGGTCTTGCTCAAAATTTCGTTGGATCGAATAACAT- 27364 Query 165280 GCATTA-CTTGAA-CCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 165337 || || ||| || || ||||| |||||| | | | || |||||||||| | Sbjct 27363 -CAATATCTTAAAGCCAAATGGTTCCTTTGGTTCTCGTGCTGCTGGTGGTAAAGATTATT 27305 Query 165338 CGGCATCAAGATATATTT 165355 | || | |||||||||| Sbjct 27304 CTGCTGCGAGATATATTT 27287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628512501196800