Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_023615.1
Length=196456
Score E
Sequences producing significant alignments: (Bits) Value
seq1221 134 2e-26
seq1913 84.2 3e-11
seq2080 82.4 1e-10
>seq1221
Length=135038
Score = 134 bits (148), Expect = 2e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 171613 GAACTTTTATGGGTTATTAAAGGTTCAACTGATTCAAAACAATTAAATGATATAGGTGTT 171672
|||||||||||| || || ||||| |||||| | |||| ||||| ||| | ||||||
Sbjct 40513 GAACTTTTATGGTTTGTTTCTGGTTCCACTGATGCTAAACTATTAAGTGACAAGGGTGTT 40572
Query 171673 AAAGTTTGGAATGATAATGGTTCTCGTGAATTTTTAGATTTATGCGGGTTTACTGAAAGA 171732
||| | ||| | | || ||||| ||||||||||| ||| || || || ||| | |
Sbjct 40573 AAAATCTGGGAGGGGAACGGTTCACGTGAATTTTTGGATAAATTGGGATTAACTCATCGT 40632
Query 171733 AAAGAAGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATAT 171792
|||||||||||||| ||| |||||||||| |||||||||||| || || |||||
Sbjct 40633 CGTGAAGGTGATTTAGGACCAGTTTATGGATTCCAATGGAGACATTTCGGAGCCGAATAT 40692
Query 171793 ATCGACTGTTATACAGATTACACAGGACAAGG 171824
| || ||| ||| || || || || || ||
Sbjct 40693 CTAGATTGTGATAGTGACTATACTGGTCAGGG 40724
>seq1913
Length=74342
Score = 84.2 bits (92), Expect = 3e-11
Identities = 48/49 (98%), Gaps = 0/49 (0%)
Strand=Plus/Minus
Query 50438 CATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCTCA 50486
|||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 15910 CATATAATGCTGATTTTGATGGGGATGAAATGAATTTACATGTTCCCCA 15862
>seq2080
Length=64058
Score = 82.4 bits (90), Expect = 1e-10
Identities = 139/198 (70%), Gaps = 4/198 (2%)
Strand=Plus/Minus
Query 165160 ATTAAAGTTGCTCAATTAAGTGGGTATGTTGCAGAACAAACAGATTATAAACATGGTGAA 165219
||||||||||||||||| || |||||| ||| | |||| |||| | |||||||||
Sbjct 27482 ATTAAAGTTGCTCAATTGGCAGGTTATGTTAGTGAAAACACAGGTTATCACCATGGTGAA 27423
Query 165220 CAAAATTTATGTGAAACTATAATTAAGTTTGCCCAAGATTTTGTTGGTACAAATAATATA 165279
||| ||| | |||| || ||| |||| ||| |||| ||||| | ||||| ||
Sbjct 27422 CAATCCTTAATTCAAACAATTATTGGTCTTGCTCAAAATTTCGTTGGATCGAATAACAT- 27364
Query 165280 GCATTA-CTTGAA-CCTGATGGTCAATTTGGTACCAGATTAGAAGGAGGTAAAGATTCTG 165337
|| || ||| || || ||||| |||||| | | | || |||||||||| |
Sbjct 27363 -CAATATCTTAAAGCCAAATGGTTCCTTTGGTTCTCGTGCTGCTGGTGGTAAAGATTATT 27305
Query 165338 CGGCATCAAGATATATTT 165355
| || | ||||||||||
Sbjct 27304 CTGCTGCGAGATATATTT 27287
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628512501196800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |