Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq221 197 3e-45 seq1836 196 9e-45 seq481 141 2e-28 >seq221 Length=38424 Score = 197 bits (218), Expect = 3e-45 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| ||||| || | || ||| || || | |||||||||||| || ||||| |||||| Sbjct 37653 ACCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACT 37712 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || ||||||| ||||| | |||||| ||||||||||||| |||||||||||| || || Sbjct 37713 TAAGGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGG 37772 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||||||||||||||| | ||| ||||| ||||| || || | ||| || Sbjct 37773 AATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGAC 37832 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATT 82811 ||||||||| || ||||| || || || ||||| || || || |||||| Sbjct 37833 TTCCAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATT 37881 >seq1836 Length=79629 Score = 196 bits (216), Expect = 9e-45 Identities = 180/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 82583 ACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGA 82642 ||| |||||||| | | ||| ||||| | ||||||||| || || ||||| |||||||| Sbjct 56890 ACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGA 56949 Query 82643 TAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGG 82702 || | ||||||||||||||| ||| || |||||||| |||| ||||||||| || || || Sbjct 56950 TAAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGG 57009 Query 82703 TATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTAC 82762 || |||||||| ||||| ||||| | ||| ||||| ||||| || ||| || ||| || Sbjct 57010 AATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAAC 57069 Query 82763 TTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||| || || || ||||| || || || ||||| || || || ||||| Sbjct 57070 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||| ||||| | ||| ||||| || || || || || |||| Sbjct 57117 TACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 57176 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | ||||||||||||||| || || || ||||| || | ||||||||| ||||| | Sbjct 57177 ATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTG 57236 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || |||||||| ||||| || || | || || || ||||| || ||| || ||| | Sbjct 57237 GAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAA 57296 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| || || || ||||| || || || ||||| || || || ||||| Sbjct 57297 CTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 >seq481 Length=384 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 82605 AAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGT 82664 ||||| | ||| ||||| || || || || || ||||||| | ||||||||||||||| Sbjct 3 AAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAAC 62 Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || || || ||||| || | ||||||||| || || || || |||||||| ||||| || Sbjct 63 TGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATT 122 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784 || | || || || ||||| || ||| || ||| ||||| || || || ||||| || Sbjct 123 TTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCA 182 Query 82785 GTCAACGTCTTTACAAATATCTGCAT 82810 || || ||||| || || || ||||| Sbjct 183 GTTAAAGTCTTAACGAAGATTTGCAT 208 Score = 127 bits (140), Expect = 4e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| |||||||| | || ||| ||||| | ||| ||||| || || || || || |||| Sbjct 208 TACCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAG 267 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 ||| | ||||||||||||||| || || || ||||| || | ||||||||| || || | Sbjct 268 ATAAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTG 327 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCA 82751 | || |||||||| ||||| || || | || || || ||||| || ||| Sbjct 328 GAATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCA 377 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981797260406820