Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq333 277 4e-69
seq1891 203 8e-47
seq1111 96.9 8e-15
seq88 91.5 3e-13
seq2080 87.8 4e-12
>seq333
Length=169781
Score = 277 bits (306), Expect = 4e-69
Identities = 586/865 (68%), Gaps = 11/865 (1%)
Strand=Plus/Minus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
||||||||||||||||||| | ||| | ||||||| | ||||| ||||| | |
Sbjct 51251 ACTATTTTGGTTTCAAAACCTTGGAAAGATCTTATTTGTTACGTGTTAATGGTAAAGTTG 51192
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
|||| | |||||||| | || | | ||||| |||||||||||||| | ||||||
Sbjct 51191 CTGAAAGACCTCAACATTTACTTATGAGAGTTGCTATTGGTATTCATGGTGAAGATATTC 51132
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTA 110481
|| ||||||| ||| || || | | |||| | || |||| | || |
Sbjct 51131 CCCGAGTAATTGAATCATATAATTTAATGTCTCAAAAATACTTTACCCATGGGTCCCCCA 51072
Query 110482 CCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAGGAATT 110540
| |||| || || || ||| | |||| || |||| || |||||| | | ||
Sbjct 51071 CGTTATTCAATGCTGGTACTCCAAGTCCACAAATGTCTTCGTG-TTTCTTGGTTGCTATG 51013
Query 110541 AACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAAC-TGCTCTTATTTCTAA 110599
|| || ||||| ||||| |||||||| || | ||||||| |||| | ||||| ||
Sbjct 51012 AAGGAAGATTCCATTGATGGTATTTACGACACG-TTAAAGACGTGTGCTTTAATTTCCAA 50954
Query 110600 AAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGC 110659
| |||| || ||||| | || ||||| |||| || | | || | |||| ||
Sbjct 50953 GAGTGCTGGTGGTATTGGGTTACATATTCATAATATCCGGGCCACTGGTTCTTATATTGC 50894
Query 110660 AACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGC 110719
| || ||| |||| | || || | || ||| | ||||| |||||| |||| ||
Sbjct 50893 TGGTACCAATGGTACTTCCAACGGTATTATCCCCATGGTTAGAGTTTTCAACAACACGGC 50834
Query 110720 AAAATATGTGAATCAAGGTGGTAA---GAGAAATGGCTCATTTGCTATCTATCTCGAACC 110776
||||| ||||||||||||| |||| || | ||||| | ||| | |||||
Sbjct 50833 TCGTTATGTTGATCAAGGTGGTAACAAGAGACCAGGAGCTTTTGCCCTTTATTTAGAACC 50774
Query 110777 TTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACA 110836
||||||| | ||||| ||||| ||| | || || | |||||| || ||||||
Sbjct 50773 TTGGCATGCGGATATTTTTGATTTCATTGATATTAGAAAAAATTCCGGTAAGGAAGAAAT 50714
Query 110837 AAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCA 110896
||||| | |||||||| || | |||||| | ||||||||||||||||| ||| |
Sbjct 50713 TAGAGCTAGAGATTTATTCCCGGCGTTATGGATTCCGGATTTATTCATGAAACGAGTTGA 50654
Query 110897 AGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATA 110956
| ||||||| ||| || | | | || || |||||||| || ||||||| ||
Sbjct 50653 ACAAAATGGAGAATGGACTTTGTTTTCACCAAATGAAGCTCCTGGTTTACCTGATGTTTA 50594
Query 110957 TGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGG-CAAGTTTCGCAAAC 111015
||| | || |||||||| | || |||| |||||||| |||||| | | | | ||||
Sbjct 50593 TGGTGATGAATTTGAAGAATTATATGAAAGATATGAAAGAGAAGGTCGTGGTACTAAAAC 50534
Query 111016 AAATTCCA-GCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACT 111074
| || | |||||| || | |||| ||| | ||| | ||| |||||| || |||
Sbjct 50533 TA--TCAAGGCTCAAAAATTATGGTATTCTATCTTGGAAGCTCAAACTGAAACAGGTACT 50476
Query 111075 CCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGGAACA 111134
|| | ||| || ||||| ||| | ||| ||||| ||||||| |||||||||
Sbjct 50475 CCATTTATGTTATATAAGGATGCTTGTAACAAAAAATCCAATCAAAAGAATTTAGGGGTT 50416
Query 111135 ATTAAGTCTAGTAATTTGTGCTGTG 111159
||||| ||| |||||| || ||||
Sbjct 50415 ATTAAATCTTCTAATTTATGTTGTG 50391
Score = 141 bits (156), Expect = 2e-28
Identities = 390/590 (66%), Gaps = 27/590 (5%)
Strand=Plus/Minus
Query 131433 TATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTCT 131492
|||| ||||||| | |||| || | | | |||||||| ||| ||| || | ||||
Sbjct 14534 TATTCCCAATTAGATATCATGAAATATGGCAAATGTATAAAAAAGCTGAAGCTTCATTCT 14475
Query 131493 GGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTTGA 131552
|||| | |||||| |||||| | | || ||| | | |||||| || ||| | ||||
Sbjct 14474 GGACCGCTGAAGAAATCGATTTAAGTAAGGATTTACACGATTGG-AACAATAGA--TTGA 14418
Query 131553 ATGAAAAAGA------TTTTGTTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGCA 131606
|||| || || ||| ||||| ||| | || ||||| || | |||||| |
Sbjct 14417 ATGATAATGAACGTTATTTCATTTCCCGAGTATTAGCCTTCTTTGCTGCTTCTGATGGTA 14358
Query 131607 TTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAATTGATATTCCTGAAGTAACAT 131666
| |||| ||||||| | || |||||| | ||| || | ||||||||| | |
Sbjct 14357 TAGTTAATGAAAATTTAGTGGAAAATTTCTGTGCTGAAGTTCAAGTTCCTGAAGCTAAAG 14298
Query 131667 CGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTATTGA 131726
| ||||| || ||| | ||||| |||||| || | ||||| | ||||
Sbjct 14297 CATTCTATGGTTTCCAAATCATGATTGAAATGATTCATTCTGAAGTTTATTCTCTTTTGA 14238
Query 131727 TTGAGAGTCTTGTTAAAAATG---AAGATGATAAAAATAAATTATTTGATGCTGTAAATA 131783
| || | | |||||| || |||| | | || | ||||||||||| | |||
Sbjct 14237 TAGATACTTATGTTAAGGATCCTCAAGAAGCTGAATTT---TTATTTGATGCAATTCATA 14181
Query 131784 AATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGAT---GATT 131840
|||| ||| ||||| || | |||||| | |||||||| ||| |||
Sbjct 14180 CTATTCCATGTATTGCCAAGAAGGCCAACTGGGCTTTGAAATGGATCGCCGATAAGGATG 14121
Query 131841 CCGCTAATTTTTCTACAAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAG 131900
|| || | | || |||| | || || |||||| | |||||||||| ||||||
Sbjct 14120 CC-TTA--TATGCTGAAAGATTAGTTGCCTTTGCTGCTATTGAAGGTATTTTCTTT---A 14067
Query 131901 GTGCTTTCTGTGCT---ATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCAT 131957
||| | || |||| || || ||| | ||||| | ||||| ||||| ||| | | |
Sbjct 14066 GTGGATCCTTTGCTTCGATTTTCTGGTTAAAGAAAAGAGGATTAATGCCAGGATTAACTT 14007
Query 131958 TGTCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCT 132007
| || ||| |||| || || |||||||||| ||| |||||||| ||||||
Sbjct 14006 TCTCTAATGAATTAATTTCAAGAGATGAAGGATTACATACTGATTTTGCT 13957
>seq1891
Length=76648
Score = 203 bits (224), Expect = 8e-47
Identities = 511/773 (66%), Gaps = 19/773 (2%)
Strand=Plus/Minus
Query 110369 TCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAAGCTGT 110428
||||||| | ||||||||||| ||||| || || |||||| ||||| || || | ||
Sbjct 37621 TCCTCAATATATGTTTCTTCGAGTTGCTATAGGAATTCATTTTGATGATCTTGAATCGGT 37562
Query 110429 TATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATTCATGCTACTCCTACCCTATT 110488
|||| ||||| | | |||| | ||| |||||| |||| || |||
Sbjct 37561 AGTTGAGACATATGACTTGATGTCCCAAAAATATCTTATACATGCTTCTCCCACGTTATA 37502
Query 110489 TAACGCAGGAACTAATGGAGGACAATT----GGCTTCTTGCTTTCTTCTAGGAATTAACG 110544
|| | ||||| ||| ||||| | | || || || ||| ||| || || |
Sbjct 37501 CAATTCCGGAAC----GGAATTCAATTATTTGTCGTCATGTTTCCTTTTAGCTATGAAGG 37446
Query 110545 ATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTTCTAAAAACT 110604
| |||||||| || || || || | | ||| | || | || | || || ||| |
Sbjct 37445 AAGATTCTATAGATGGAATCTACAAAACCCTTCATGAGGCAGCATTAATCTCGAAAGCAT 37386
Query 110605 CTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATCGCAACAG 110664
| || || || ||||| || | |||||||| | | || ||| || ||| |||
Sbjct 37385 CAGGGGGGATCGGTATACATATGCATGATATAAGGGCCAACGGAACATTTATTGCAGGTA 37326
Query 110665 CGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACTGCAAAAT 110724
|||| || | ||| | ||| | ||||| |||||| | || || || | ||||| | |
Sbjct 37325 CGAATGGAGTTTCCAACGGATTAGTTCCCATGTTACGTGTATTTAATAATACTGCCAGGT 37266
Query 110725 ATGTGAATCAAGG---TGGTAAGAGAAATGGCTCATTTGCTATCTATCTCGAACCTTGGC 110781
|||| ||||||| |||||| ||| ||| | ||| | || ||| | ||||||||||
Sbjct 37265 ATGTAGATCAAGGCGGTGGTAAAAGACCTGGGGCTTTTTCAATGTATATAGAACCTTGGC 37206
Query 110782 ATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAGAACAAAGAG 110841
|| | ||||| ||||| | |||||| | || || || || || ||| || || |||
Sbjct 37205 ATGCTGATATCTTTGATATTTTAGAAATGCGGAAGAACCACGGTAATGAGGAGCATAGAA 37146
Query 110842 CACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGTTCAAGAAA 110901
| | ||||| ||||||| | ||||| | ||||| || |||||||| ||| |||||
Sbjct 37145 CTAGAGATTTGTTTTATGGGTTATGGATACCTGATTTGTTTATGAAACGAGTTAAAGAAG 37086
Query 110902 ATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGTATATGGAA 110961
|| ||| | | | | || || ||||||| || |||||| |||||
Sbjct 37085 ATAAAGACTGGAGTTTGTTTTCCCCCAATGAAGCTCCTGGGTTAAGTGATGTGTATGGGG 37026
Query 110962 AAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAAA--CAA-- 111017
| ||||||| || | || |||||||||||| | ||| | || ||| | | |
Sbjct 37025 ACGAGTTTGTTGAATTGTATGAAAAATATGAACAGCAAG----GATTGGCATATTCTACG 36970
Query 111018 ATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGAACTCCT 111077
|| ||||| | | ||||| ||| | ||||||||| |||||| || | |||
Sbjct 36969 GTTAAGGCTCATAAGTTATGGTTAGCAATATTAGAATCACAAACTGAAACGGGGATTCCA 36910
Query 111078 TATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130
||||| | ||||||||| | |||| || |||||||||| |||||||||
Sbjct 36909 TATATGCTATATAAAGATGCTTGTAATATTAAGTCTAATCAAAAGAATTTAGG 36857
>seq1111
Length=330748
Score = 96.9 bits (106), Expect = 8e-15
Identities = 139/191 (73%), Gaps = 10/191 (5%)
Strand=Plus/Plus
Query 305301 TTATCAGACATTTGAATGACAATGATTGGGTTCTGTTCAATAGGCAACCATCACTGCATA 305360
|||| |||||| | || || ||||| |||| | | ||| | ||||| || | ||||
Sbjct 201258 TTAT-AGACATATTAAAAACCATGATGTGGTTATTATGAATCGTCAACCTACATTACATA 201316
Query 305361 AAATGTCTATGATGGCTCATAAAGTCAAAGTATTATCTGGATTGACATTTC---GATTAA 305417
| ||||||||||| ||||||||| |||||| |||| || || |||||
Sbjct 201317 AGGCGTCTATGATGGGTCATAAAGTTCGAGTATTGCCTGGGGAGAAGACTCTCAGATTAC 201376
Query 305418 ATGTAAGTGCTTGTAC---GCCTTATAATGCGGATTTTGATGGAGATGAAATGAATATGC 305474
|| || |||| ||| | |||||||||| ||||||||||| ||||||||||||||||
Sbjct 201377 AT-TA--TGCTAATACTGGGGCTTATAATGCTGATTTTGATGGGGATGAAATGAATATGC 201433
Query 305475 ATGTACCTCAA 305485
|| | || |||
Sbjct 201434 ATTTCCCGCAA 201444
>seq88
Length=45284
Score = 91.5 bits (100), Expect = 3e-13
Identities = 120/159 (75%), Gaps = 8/159 (5%)
Strand=Plus/Plus
Query 305334 TGTTCAATAGGCAACCATCACTGCATAAAATGTCTATGATGGCTCATAAAGTCAAAGTAT 305393
|||| ||| | ||||| ||| | ||||||||||| |||||| |||| ||| |||||
Sbjct 19233 TGTTTAATCGTCAACCTTCATTACATAAAATGTCCATGATGTGTCATCGAGTTAAAGT-- 19290
Query 305394 TAT-CTGGATTG-ACATTTCGATTAAA--TGTAAGTGCTTGTACGCCTTATAATGCGGAT 305449
||| | ||| |||||| ||||||| ||| ||| || | || |||||||| |||
Sbjct 19291 TATGCCCTATTCTACATTTAGATTAAACTTGTCGGTGAC-GT-CACCATATAATGCTGAT 19348
Query 305450 TTTGATGGAGATGAAATGAATATGCATGTACCTCAATCA 305488
|| ||||| |||||||||||| | || || || ||||||
Sbjct 19349 TTCGATGGGGATGAAATGAATTTACACGTGCCACAATCA 19387
>seq2080
Length=64058
Score = 87.8 bits (96), Expect = 4e-12
Identities = 345/528 (65%), Gaps = 20/528 (4%)
Strand=Plus/Minus
Query 279806 GAATTTATTGATAAAGAACTGATCCATTTTTCT-AAT-TATGATGTTCATCGTTCTATTC 279863
|| |||||| |||| ||| | ||| || |||| ||| | |||| | | | ||||| |
Sbjct 27617 GATTTTATTAATAAGGAATTAATC--TTATTCTCAATGTCTGATAATGTTAGATCTATCC 27560
Query 279864 C-TCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAA 279922
| || || || | || || ||||| || | || || |||| |||||| ||
Sbjct 27559 CCTCGGTTCTTG-ACGGGTTAAAACCAGGTCAAAGAAAAGTTTTATTTGGTTGTTATAAG 27501
Query 279923 AGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCA 279982
|||||| | | |||||||| |||||||| || |||||||||||| ||| | ||
Sbjct 27500 AGAAAACTTCGACAGGAAATTAAAGTTGCTCAATTGGCAGGTTATGTTAGTGAAAACACA 27441
Query 279983 GGTTATCATCACGGTG---AAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGAT 280039
|||||||| || |||| || | | ||||| | ||| | |||||||| ||| ||
Sbjct 27440 GGTTATCACCATGGTGAACAATCCTTAATTCAA---ACAATTATTGGTCTTGCTCAAAAT 27384
Query 280040 TTTATGGCTTCAAACAACTTAAATCTGCTTTCA-CCAAATGGTCAATTTGGTTCTCGTAT 280098
|| | | || || ||| | ||| | ||| | ||||||||| ||||||||||||
Sbjct 27383 TTCGTTGGATCGAATAACATCAATAT-CTTAAAGCCAAATGGTTCCTTTGGTTCTCGTGC 27325
Query 280099 TCACAATGGAAAAGATCATGGTAGTGCTCGTTACA--TACATACATGTCTTTCAGATATT 280156
| ||| |||||| || | ||| | || | | || | | || | || |||
Sbjct 27324 TGCTGGTGGTAAAGATTATTCTGCTGCGAGATATATTTTCACAGAAATCAAT--GAAATT 27267
Query 280157 ACAAACA-AGTTATTTATCAATTCTGATAATGCTTCATTAGAGTGGCTAGAGGATGATGG 280215
||||| | | || || ||| ||| ||| || | | || | | | |||||||
Sbjct 27266 ACAAAAACAATTTTTAATCCATT-GGATGATCCATTATATACTTATGTTCAAGATGATGA 27208
Query 280216 TCTTGCTATTGAACCAACATATTATGCTCCAATTATCCCTATGATTCTTGTTAATGGTGC 280275
| | | || ||||| | ||| || || | || |||||| | || ||||||||
Sbjct 27207 ACAAACAGTAGAGCCAACGTGGTATTTACCTGTTTTACCCATGATTTTGGTAAATGGTGC 27148
Query 280276 TCAAGGAATTGGAACAGGTTATTCTACATCTATCCCAATGTACAATCC 280323
|||| |||||||| |||| || || |||||| ||||||||
Sbjct 27147 CGAAGGTATTGGAACTGGTTGGTCAACCAATATCCCCTCATACAATCC 27100
Score = 84.2 bits (92), Expect = 5e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 278166 TTGCAATGCATCCTAAGGAAAACAAGTACACAGTTGAAATGATATTTGGGAATTTATTGA 278225
||| |||||| |||||||||| | ||| | ||| | || ||||| |||||||| |
Sbjct 29344 TTGAAATGCACACTAAGGAAAATATGTATATCCCAGAACTAATTTTTGGTAATTTATTAA 29285
Query 278226 CATCTACTAATTACAAGGAAGATGAAGAGCGACTCACAGGAGGCAAAAATGGATATGGGG 278285
| ||| | ||||| || || || || | | | || || || | |||||| ||||| |
Sbjct 29284 CTTCTTCCAATTATAATGATGACGAGAAAAAAGTTACTGGTGGTAGAAATGGGTATGGTG 29225
Query 278286 CAAAGCTGACAAATATCTTCTCAAAATGCTTTGAAGTTGAAACTGTTGATAAAAAGACT 278344
| || | ||||| ||||||| |||||||||||||||| |||| ||| |||
Sbjct 29224 CTAAATTATGTAATATTTTCTCAACTGAATTTGAAGTTGAAACTGCTGATTTAAACACT 29166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186776609627180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |