Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq333 199 3e-46
seq2047 140 3e-28
>seq333
Length=169781
Score = 199 bits (220), Expect = 3e-46
Identities = 585/887 (66%), Gaps = 21/887 (2%)
Strand=Plus/Minus
Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756
|| ||||| | || |||||| ||||||||| |||||||||||||| |||||||| |
Sbjct 14544 AGATTTGTTATATTCCCAATTAGATATCATGAAATATGGCAAATGTATAAAAAAGCTGAA 14485
Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812
|| ||||| ||||| || |||||| | ||||| | ||| || ||| ||| ||||||
Sbjct 14484 GCTTCATTCTGGACCGCTGAAGAAATCGATTTAAGTAAGGATTTA-CACGATTGGAACAA 14426
Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872
| ||| || | ||| |||| || || || || || || ||||||||
Sbjct 14425 TAGATTGAATGATAATGAACGTTATTTCATTTCCCGAGTATTAGCCTTCTTTGCTGCTTC 14366
Query 43873 CGACGGGATAGTCAATGAAAATTTGGT-TAGTCGGTTTGCGCAAGAAGTTCAATTACCAG 43931
|| || ||||| ||||||||||| || | | || || ||||||||| | || |
Sbjct 14365 TGATGGTATAGTTAATGAAAATTTAGTGGAAAATTTCTGTGC-TGAAGTTCAAGTTCCTG 14307
Query 43932 AAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACA 43991
|||| | || ||||| || ||||| || |||| |||||||| ||| | ||
Sbjct 14306 AAGCTAAAGCATTCTATGGTTTCCAAATCATGATTGAAATGATTCATTCTGAAGTTTATT 14247
Query 43992 GTCTTCTGATAGATACGTACATCAAAGATGGGCACGAGAAGC--ATCGATTGTTTAATGC 44049
|||| |||||||||| || | || ||| | | |||||| | || ||| ||||
Sbjct 14246 CTCTTTTGATAGATACTTATGTTAAGGAT--CCTCAAGAAGCTGAATTTTTATTTGATGC 14189
Query 44050 GATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTC 44109
|| | || | || ||| | || || ||||||| | ||||||||
Sbjct 14188 AATTCATACTATTCCATGTATTGCCAAGAAGGCCAACTGGGCTTTGAAATGGATCGCCGA 14129
Query 44110 AAATGATTCTTT---TGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTT 44166
|| ||| | || || ||| || | || || ||||| | | | ||||| ||||||||
Sbjct 14128 TAAGGATGCCTTATATGCTGAAAGATTAGTTGCCTTTGCTGCTATTGAAGGTATTTTCTT 14069
Query 44167 TTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGAC 44226
| ||||| ||||| | || || |||||||||||| |||| || ||||| || || ||
Sbjct 14068 TAGTGGATCCTTTGCTTCGATTTTCTGGTTAAAGAAAAGAGGATTAATGCCAGGATTAAC 14009
Query 44227 GTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTT 44286
|| || ||||| ||||| | |||||||| |||||| ||||||||||| ||||
Sbjct 14008 TTTCTCTAATGAATTAATTTCAAGAGATGAAGGATTACATACTGATTTTGCTTGTATGTT 13949
Query 44287 ACTTGGATATCTAGGAGACGATAAGCCT--TCATGTAAGACAATTACAGATATTGTTGTA 44344
| ||| || || ||| ||| ||| || | || | | ||| ||| ||||
Sbjct 13948 ATTTGCCCATTTA-AAGA--ATAGACCTGATCCAG-AAATCGTGCAAAGA-ATTATTGTT 13894
Query 44345 GAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATAGGA 44404
|| || || || ||| | |||| | | || || ||||| || | ||| ||||
Sbjct 13893 GAAGCTGTTGCTATTGAAAAGGAATATTTCACTGATGCTTTACCAGTTAGTTTGTTAGGT 13834
Query 44405 ATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTGGAA 44464
||||| || ||| |||||| |||| | | || ||| | ||| | | |
Sbjct 13833 ATGAACTCGGGATTAATGTGTCAATATGTTGAGTTTGTAGCTGATAGATTATTGGTTGCT 13774
Query 44465 CTGGGTTGCGATAAACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAATATTTCG 44524
| ||| | || |||| |||| || || |||||||| ||||| ||||||||
Sbjct 13773 TTTGGTAATAAGAAGGTATATAATGTAACTAATCCATTTGATTTCATGGAGAATATTTCC 13714
Query 44525 TTGGAAGGCAAAACAAACTTTTTTGAAAAACGCGTTGGAGAATATCA 44571
|| | || || || || || |||||||| | ||| || |||||
Sbjct 13713 TTAGCTGGGAAGACTAATTTCTTTGAAAAGAGAGTTTCCGATTATCA 13667
>seq2047
Length=190326
Score = 140 bits (154), Expect = 3e-28
Identities = 286/420 (68%), Gaps = 25/420 (6%)
Strand=Plus/Minus
Query 19362 TGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTACA-- 19419
||| || || ||| ||| ||||| || ||||| | || | |||| | ||||
Sbjct 114892 TGGTCCTCCAGGTACTGGTAAAACTTTGATTGCTCGTAAATTATCTAAAATGCTTAACGG 114833
Query 19420 -AAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATC 19478
||| |||| |||||||| |||||||||||||| |||| ||||||||| ||| ||
Sbjct 114832 GAAAGAACCA---AAAATTGTTAATGGTCCTGAAATGTTAAGTAAATATGTTGGTGCTTC 114776
Query 19479 GGAAGAAAATGTACGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCG 19538
||||||||| | || ||| ||| || || |||| ||| | |||| ||||||
Sbjct 114775 AGAAGAAAATATTCGTAATTTATTTAAAGATGCCGAAGCTGAATATAAACAAA-AGGGCG 114717
Query 19539 CAAAAGTTC---TTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAG 19595
| ||| ||| || |||| ||| | |||||||| || | | | || |||||
Sbjct 114716 AGGA--TTCAGATTTACATGTTATTATATTTGATGAATTAGATTCTGTTTTCAAACAAAG 114659
Query 19596 AGGTTCTG---GTGTAAATGGAGTACA--------TGACACTGTTGTCAATCAACTCCTG 19644
|||||| | | | |||| |||| ||| | |||||| |||||| | ||
Sbjct 114658 AGGTTCAGCCAGATCAGATGG--TACAGGTGTTGGTGATAATGTTGTTAATCAATTATTG 114601
Query 19645 TCAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGA 19704
|| ||| | || ||||| | || | |||||||| || || ||||| ||||||||||||
Sbjct 114600 TCGAAAATGGATGGTGTGGATCAGTTAAATAATATCTTGGTCATTGGTATGACTAATAGA 114541
Query 19705 CTGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATT 19764
| || ||||| || | || || ||| |||| ||| | || ||||| | || ||||||
Sbjct 114540 TTAGATTTAATTGATACGGCATTGTTAAGACCAGGTAGATTTGAAATTCAAATTGAAATT 114481
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397444471291900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |