Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq333 136 3e-27 seq1836 100 2e-16 seq481 93.3 4e-14 seq221 91.5 1e-13 seq1891 84.2 2e-11 >seq333 Length=169781 Score = 136 bits (150), Expect = 3e-27 Identities = 214/304 (70%), Gaps = 7/304 (2%) Strand=Plus/Plus Query 131636 CCGTTCTGTTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCT 131695 || || ||||||||||| ||||| || |||||||| | ||||||||| || | |||| Sbjct 50645 CCATTTTGTTCAACTCGTTTCATGAATAAATCCGGAATCCATAACGCCGGGAATAAATCT 50704 Query 131696 CTAGCTTTTTTCTCTTCTGTACCCATAAtttttttCAAATTTAAA--AAGTCCAAAATGT 131753 |||||| | | ||||| |||| | ||||||| ||| | || || || ||||| | Sbjct 50705 CTAGCTCTAATTTCTTCCTTACC--GGAATTTTTTCTAATATCAATGAAATCAAAAATAT 50762 Query 131754 CCGCATGCCAGGGTTCCAAATACACTGCCATTGCGCCTTTGCGC---TTACCGCCTTGAT 131810 |||||||||| ||||| ||||| | || | || ||| | | ||||| ||||||| Sbjct 50763 CCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCTCCTGGTCTCTTGTTACCACCTTGAT 50822 Query 131811 TAACATGACGAACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTC 131870 ||||| |||| || |||||||| | || | | |||||| | |||||||| | | Sbjct 50823 CAACATAACGAGCCGTGTTGTTGAAAACTCTAACCATGGGGATAATACCGTTGGAAGTAC 50882 Query 131871 CATTGGTGCTCTTAATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATAC 131930 ||||||| | ||| || ||| |||| | ||| || |||| | | ||||||| Sbjct 50883 CATTGGTACCAGCAATATAAGAACCAGTGGCCCGGATATTATGAATATGTAACCCAATAC 50942 Query 131931 CTCC 131934 | || Sbjct 50943 CACC 50946 Score = 98.7 bits (108), Expect = 8e-16 Identities = 287/438 (66%), Gaps = 7/438 (2%) Strand=Plus/Plus Query 130547 GATTGCGATTGATCAATAAAAGCGCCCCTGTCTGCAGCCATGTCGAGCATGGTTTTATTT 130606 ||||| ||||||||||| || || || || || ||||| || | || ||| | Sbjct 49553 GATTGTGATTGATCAATGAAGGCAGATCTATCGGCCGCCATATCAACAATATGTTTTTGA 49612 Query 130607 TTCATCTCCCAAGCGGTCTTGTATAGATCCCTAATGTGTTTGGGTA--TGCGCGCAATCG 130664 || ||||| |||||||||||| ||| |||| | | || | | | | ||| | Sbjct 49613 GAAATTTCCCACACGGTCTTGTATAATTCCTTAATTTCATCAGGGACATTAG-GTAAT-G 49670 Query 130665 ATTGAACGCTACCGTTGTTGGCTATAATTTCGTTGCGCATACTTTTATCGTACAATCCAA 130724 |||||| ||| || ||||| ||||| | ||| || || | | ||| | Sbjct 49671 ATTGAATAGAACCATTATTGGCAATAATGCTACTCTTCATGGATTCATTCCAAATTCCTA 49730 Query 130725 GCTGTACAAGATCTTTTACCAAATGATTATTAATGATTTGAAAATCACCAGCCAGGACGC 130784 | || | |||| ||| |||| ||||| ||||| || |||||||| | || | Sbjct 49731 AATCAACTAAATCTCTTAATAAATATGGATTAACAATTTGGAATTCACCAGCTAAAACTC 49790 Query 130785 GTCTAACGTAAATGTTGCTCGTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTG 130844 ||||| ||||||||| || | |||||||| |||| || || || || ||||||| Sbjct 49791 GTCTAGAATAAATGTTGGAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTGTG 49850 Query 130845 CTGTAGTTGCGGTGGGCATGTATGCCACTAATAGAGAATTACGAAGACCGTGCGTCGTGA 130904 ||| | || || ||||| || || |||| || || | | ||| || | | | Sbjct 49851 ATGTTGACGCCGTAGGCATTGGAGCAACCAATAATGAGTTTCTTAAACCATGTTTGGCCA 49910 Query 130905 TTTTTCGCTTCAATTCATCCCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATAT 130964 ||||| ||||||| |||||||||||||| |||||||| | | ||| | || Sbjct 49911 TTTTTTGCTTCAAACTATCCCAATCCCATAATTCAGTAGGTTT---TCTTTCCCATAAAT 49967 Query 130965 CAAATTGTAGTATGCCTT 130982 ||||||| | || |||| Sbjct 49968 CAAATTGCAATAATCCTT 49985 >seq1836 Length=79629 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCT 27079 || || | ||| | ||| ||||| ||||| || || || ||||| || |||||||| | | Sbjct 57119 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 57178 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | ||| | ||||||| | ||| |||||||| |||| | | ||||| || || || Sbjct 57179 AAAGTTCTAC-CGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGG 57237 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | ||| || || || ||| ||| || | | | || | |||||| | | |||||| Sbjct 57238 AATACCTTCCTTGTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAAC 57297 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||| || |||| || || || | ||| || || |||||||||||| Sbjct 57298 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCATA 57346 Score = 91.5 bits (100), Expect = 1e-13 Identities = 164/236 (69%), Gaps = 3/236 (1%) Strand=Plus/Plus Query 27015 TTATTG-CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTA 27073 |||||| || || | ||| | || ||||| ||||| ||||| || ||||| |||||||| Sbjct 56884 TTATTGACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTA 56943 Query 27074 GTC-GCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGAT 27132 || | | | ||| | ||||||| | || ||||| || |||| | | ||||| | Sbjct 56944 ATCAGATAAAGTTCTAC-CGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGT 57002 Query 27133 CCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGG 27192 | || || | ||| || || || |||||| ||| | | || | ||||| | | Sbjct 57003 CAGGTGGAATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAG 57062 Query 27193 CTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 ||||||||||| || |||| || || || | ||| || || |||||||||||| Sbjct 57063 ATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCATA 57118 >seq481 Length=384 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 27040 CCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTCGTCTTCG 27098 |||| ||||| || || || ||||| || |||||||| | | | ||| | ||||||| Sbjct 1 CCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTAC-CGTCTTCT 59 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 | ||| |||||||| |||| | | ||||| || || || | ||| || || || | Sbjct 60 AACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 119 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 || ||| || | | | || | |||||| | | ||||||||||| || |||| || Sbjct 120 ATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTA 179 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || | ||| || || |||||||||||| Sbjct 180 CCAGTTAAAGTCTTAACGAAGATTTGCATA 209 >seq221 Length=38424 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 27035 CAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTC 27094 ||| ||||||||||| ||||| |||||||| |||||||| || || | | | | | || Sbjct 37668 CAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCATC 37727 Query 27095 TTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATC 27154 ||| | |||||||| || | || | | |||||||| || || | ||| || ||||| Sbjct 37728 TTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATC 37787 Query 27155 GGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGA 27214 |||||| ||| | | || | ||||| | || ||| ||||| | ||| || | Sbjct 37788 TTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATGGT 37847 Query 27215 TTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || | || || || || |||||||| Sbjct 37848 CTTACCAGTTAAGGTCTTAACGAAAATTTGCAT 37880 >seq1891 Length=76648 Score = 84.2 bits (92), Expect = 2e-11 Identities = 161/237 (68%), Gaps = 3/237 (1%) Strand=Plus/Plus Query 131644 TTCAACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTT 131703 || |||||| |||||||||||||| || | ||||||| | || |||| |||||||| | | Sbjct 37090 TTTAACTCGTTTCATAAACAAATCAGGTATCCATAACCCATAAAACAAATCTCTAGTTCT 37149 Query 131704 TTTCTCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCA 131763 | ||| || |||| | || || | ||||| || || || || |||||||| Sbjct 37150 ATGCTCCTCATTACCGTGGTTCTTCCGCATTTCTAAAATATCAAAGATATCAGCATGCCA 37209 Query 131764 GGGTTCCAAATACACTGCCATTGCGCCTTTGCGCTT---ACCGCCTTGATTAACATGACG 131820 ||||| | ||||| || | || || | || ||||||||||| |||| | Sbjct 37210 AGGTTCTATATACATTGAAAAAGCCCCAGGTCTTTTACCACCGCCTTGATCTACATACCT 37269 Query 131821 AACCATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGT 131877 | | || || |||| || |||||||| | || ||||||| |||||| || Sbjct 37270 GGCAGTATTATTAAATACACGTAACATGGGAACTAATCCGTTGGAAACTCCATTCGT 37326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424922074246560