Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq333 201 1e-46
seq2235 93.3 5e-14
>seq333
Length=169781
Score = 201 bits (222), Expect = 1e-46
Identities = 822/1281 (64%), Gaps = 35/1281 (3%)
Strand=Plus/Plus
Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767
|| ||||| | || ||||||||||| ||||||||||||||||||||||||| || ||
Sbjct 49799 TAAATGTTGGAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTGTGATGTTGAC 49858
Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827
|| || |||||||| || | ||| | ||| | | ||| | | || || |
Sbjct 49859 GCCGTAGGCATTGGAGCAACCAATAATGAGTTTCTTAAACCATGTTTGGCCATTTTTTGC 49918
Query 110828 TTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAA 110885
|| | | |||||| || || || || | ||||| | |||||| | ||||| || |
Sbjct 49919 TTCAAACTATCCCAATCCCATAATTCAG-TAGGTTTT-CTTTCCCATAAATCAAATTGCA 49976
Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945
| ||||| || || || || || || | ||| ||| | |||| ||| ||| |
Sbjct 49977 ATAATCCTTGAGAAGCAGGTGATCCTTCGTAAGTTGGATATGCGCCTTCTTCTTGAGCTA 50036
Query 110946 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 111005
||||| | || | | || ||||| |||||||| || || || ||| | |
Sbjct 50037 ATTCAACCGAGGATTCAACAGCAGCATGATAAATGGTTTCGAAAATTTGAATATTTAATT 50096
Query 111006 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGAC 111062
|| ||||| | |||||||||| ||| | ||| |||||| |||| || | ||
Sbjct 50097 CCCGAGCTTCTTGAGAATCAAATG-GTAAT--CTTAAACTCATAAATGCATCAGCTAAAC 50153
Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTT--TCGCG-CAGTCTCAA 111119
| || |||||||| | | ||||| | || |||||| || || | || ||| ||
Sbjct 50154 CCTGGACACCCAAGGCCACGGGTCTATTTCTCATATTTGAATTCTTGGCTTCAGG---AA 50210
Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179
| |||||| | || | ||||| ||||| |||| ||| ||||| | || || | |
Sbjct 50211 CTGGATAATAGTTACGATCAATAACTCGATTTAAATTACGAGTAACTACTTTAGTCACCT 50270
Query 111180 CATGAAGTTTTTCATAATCAAA---AGTGCGAGTCTCTTCATTG---ACATACTTTGGAA 111233
|||| | ||||||| ||| | | || || | || ||| | || | |||||
Sbjct 50271 CATGTAATTTTTCAAAATTATACCAAGAATGATTTTCATCAGTTTCCACGAATGATGGAA 50330
Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293
||| || || || ||||| || || || ||||| | | | || || | |||||
Sbjct 50331 TGGCAATAGAAGCTAAATTACACACGGCAACTTCATCAGGAGCAGAATATTCCACAATTT 50390
Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353
| |||||| || ||| ||||| ||| ||||||||||| || || ||||| |
Sbjct 50391 CACAACATAAATTAGAAGATTTAATAACCCCTAAATTCTTTTGATTGGATTTTTTGTTAC 50450
Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413
| |||||||| || | ||| | || || || || || || || | || | |||| |
Sbjct 50451 AAGCATCCTTATATAACATAAATGGAGTACCTGTTTCAGTTTGAGCTTCCAAGATAGAAT 50510
Query 111414 TCCA-AACATCGGCGGCTGGTACAATGGCGTTGG---CCCGTCCCTCCGCCTCGTACTTT 111469
||| || | | | || | || | || | | || || || || || ||
Sbjct 50511 ACCATAATTTTTGAGCCTTG----ATAGTTTTAGTACCACGACCTTCTCTTTCATATCTT 50566
Query 111470 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA 111529
|| | ||||||| || ||||| | || | | ||| || || | | |||
Sbjct 50567 TCATATAATTCTTCAAATTCATCACCATAAACATCAGGTAAACCAGGAGCTTCATTTGGT 50626
Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589
| || | || ||||| ||| || ||||| || |||||||| | || ||||||||
Sbjct 50627 GAAAACAAAGTCCATTCTCCATTTTGTTCAACTCGTTTCATGAATAAATCCGGAATCCAT 50686
Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649
| | | || | ||||||| | | ||||| | ||| || || | |||
Sbjct 50687 AACGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGGAATTTTTTCTAATATCA 50746
Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTT 111705
| ||| || | |||||||| ||||| || || | ||| | || | || ||| ||
Sbjct 50747 ATGAAATCAAAAATATCCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCTCCTGGTCTC 50806
Query 111706 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765
| | || | |||||| ||||| || || ||| ||| || || | || ||| || ||
Sbjct 50807 TTGTTACC-ACCTTGATCAACATAACGAGCCGTGTTGTTGAAAACTCTAACCATGGGGAT 50865
Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825
|||||| | || |||||| || || |||| ||| | |||| | | || |||
Sbjct 50866 AATACCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCCCGGATATTATG 50925
Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885
|| || | ||||||||| ||||| | ||| || ||| |||||| | | | || |
Sbjct 50926 AATATGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTCTTTAACGTGTC 50985
Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945
|| ||||| | || || || ||||| | || | | ||| || ||||| || ||
Sbjct 50986 GTAAATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACGAAGACATTTGTGG 51045
Query 111946 TCTTGGTGTACCAGCATTGAA 111966
||||| ||||||||||||||
Sbjct 51046 ACTTGGAGTACCAGCATTGAA 51066
>seq2235
Length=55310
Score = 93.3 bits (102), Expect = 5e-14
Identities = 157/225 (70%), Gaps = 2/225 (1%)
Strand=Plus/Plus
Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689
|||||||| ||||||| || |||||| |||| |||||| ||||| | | || | |
Sbjct 20262 GCATCAATTTCATCAACAAATACAATAGATGGCGCATTTTCTCGGGCAGTCTTGAATAAA 20321
Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCAC 11749
|| ||||| || ||||||| || |||||||||||||| ||||| | | |||| ||
Sbjct 20322 TCACGAACTCTACTGGCACCTACCCCAACAAACATCTCAACAAATTCAGAACCAGA-AAC 20380
Query 11750 TGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808
| || ||||| || | |||||| || |||| |||| || || || || ||
Sbjct 20381 AGAATAAAATGGTACCCCAGCTTCACCTGCAGTGGCCTTCGCGATAAGAGTTTTACCAGT 20440
Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853
||| || ||||| ||||| || || || || || || || ||
Sbjct 20441 ACCGGGAGGACCCGAGAGAATAGCCCCACGAGGAATTTTTGCCCC 20485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628013316048000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |