Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq333 201 1e-46 seq2235 93.3 5e-14 >seq333 Length=169781 Score = 201 bits (222), Expect = 1e-46 Identities = 822/1281 (64%), Gaps = 35/1281 (3%) Strand=Plus/Plus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 || ||||| | || ||||||||||| ||||||||||||||||||||||||| || || Sbjct 49799 TAAATGTTGGAAGTATATGGTTCAAAACATTCATTATTACCCAAGATTTGTGATGTTGAC 49858 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCC 110827 || || |||||||| || | ||| | ||| | | ||| | | || || | Sbjct 49859 GCCGTAGGCATTGGAGCAACCAATAATGAGTTTCTTAAACCATGTTTGGCCATTTTTTGC 49918 Query 110828 TTGAGAACATCCCAGTCG--TAGTTGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAA 110885 || | | |||||| || || || || | ||||| | |||||| | ||||| || | Sbjct 49919 TTCAAACTATCCCAATCCCATAATTCAG-TAGGTTTT-CTTTCCCATAAATCAAATTGCA 49976 Query 110886 GCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCA 110945 | ||||| || || || || || || | ||| ||| | |||| ||| ||| | Sbjct 49977 ATAATCCTTGAGAAGCAGGTGATCCTTCGTAAGTTGGATATGCGCCTTCTTCTTGAGCTA 50036 Query 110946 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 111005 ||||| | || | | || ||||| |||||||| || || || ||| | | Sbjct 50037 ATTCAACCGAGGATTCAACAGCAGCATGATAAATGGTTTCGAAAATTTGAATATTTAATT 50096 Query 111006 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA---ATAAATACATCCGCGAGAC 111062 || ||||| | |||||||||| ||| | ||| |||||| |||| || | || Sbjct 50097 CCCGAGCTTCTTGAGAATCAAATG-GTAAT--CTTAAACTCATAAATGCATCAGCTAAAC 50153 Query 111063 CTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTT--TCGCG-CAGTCTCAA 111119 | || |||||||| | | ||||| | || |||||| || || | || ||| || Sbjct 50154 CCTGGACACCCAAGGCCACGGGTCTATTTCTCATATTTGAATTCTTGGCTTCAGG---AA 50210 Query 111120 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTT 111179 | |||||| | || | ||||| ||||| |||| ||| ||||| | || || | | Sbjct 50211 CTGGATAATAGTTACGATCAATAACTCGATTTAAATTACGAGTAACTACTTTAGTCACCT 50270 Query 111180 CATGAAGTTTTTCATAATCAAA---AGTGCGAGTCTCTTCATTG---ACATACTTTGGAA 111233 |||| | ||||||| ||| | | || || | || ||| | || | ||||| Sbjct 50271 CATGTAATTTTTCAAAATTATACCAAGAATGATTTTCATCAGTTTCCACGAATGATGGAA 50330 Query 111234 GGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTT 111293 ||| || || || ||||| || || || ||||| | | | || || | ||||| Sbjct 50331 TGGCAATAGAAGCTAAATTACACACGGCAACTTCATCAGGAGCAGAATATTCCACAATTT 50390 Query 111294 CTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGC 111353 | |||||| || ||| ||||| ||| ||||||||||| || || ||||| | Sbjct 50391 CACAACATAAATTAGAAGATTTAATAACCCCTAAATTCTTTTGATTGGATTTTTTGTTAC 50450 Query 111354 ACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCT 111413 | |||||||| || | ||| | || || || || || || || | || | |||| | Sbjct 50451 AAGCATCCTTATATAACATAAATGGAGTACCTGTTTCAGTTTGAGCTTCCAAGATAGAAT 50510 Query 111414 TCCA-AACATCGGCGGCTGGTACAATGGCGTTGG---CCCGTCCCTCCGCCTCGTACTTT 111469 ||| || | | | || | || | || | | || || || || || || Sbjct 50511 ACCATAATTTTTGAGCCTTG----ATAGTTTTAGTACCACGACCTTCTCTTTCATATCTT 50566 Query 111470 GTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGA 111529 || | ||||||| || ||||| | || | | ||| || || | | ||| Sbjct 50567 TCATATAATTCTTCAAATTCATCACCATAAACATCAGGTAAACCAGGAGCTTCATTTGGT 50626 Query 111530 CAGAAAAGAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCAC 111589 | || | || ||||| ||| || ||||| || |||||||| | || |||||||| Sbjct 50627 GAAAACAAAGTCCATTCTCCATTTTGTTCAACTCGTTTCATGAATAAATCCGGAATCCAT 50686 Query 111590 AGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCA 111649 | | | || | ||||||| | | ||||| | ||| || || | ||| Sbjct 50687 AACGCCGGGAATAAATCTCTAGCTCTAATTTCTTCCTTACCGGAATTTTTTCTAATATCA 50746 Query 111650 AGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTT 111705 | ||| || | |||||||| ||||| || || | ||| | || | || ||| || Sbjct 50747 ATGAAATCAAAAATATCCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCTCCTGGTCTC 50806 Query 111706 TCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 111765 | | || | |||||| ||||| || || ||| ||| || || | || ||| || || Sbjct 50807 TTGTTACC-ACCTTGATCAACATAACGAGCCGTGTTGTTGAAAACTCTAACCATGGGGAT 50865 Query 111766 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 111825 |||||| | || |||||| || || |||| ||| | |||| | | || ||| Sbjct 50866 AATACCGTTGGAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCCCGGATATTATG 50925 Query 111826 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 111885 || || | ||||||||| ||||| | ||| || ||| |||||| | | | || | Sbjct 50926 AATATGTAACCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTCTTTAACGTGTC 50985 Query 111886 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 111945 || ||||| | || || || ||||| | || | | ||| || ||||| || || Sbjct 50986 GTAAATACCATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACGAAGACATTTGTGG 51045 Query 111946 TCTTGGTGTACCAGCATTGAA 111966 ||||| |||||||||||||| Sbjct 51046 ACTTGGAGTACCAGCATTGAA 51066 >seq2235 Length=55310 Score = 93.3 bits (102), Expect = 5e-14 Identities = 157/225 (70%), Gaps = 2/225 (1%) Strand=Plus/Plus Query 11630 GCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTTCAAAGAGA 11689 |||||||| ||||||| || |||||| |||| |||||| ||||| | | || | | Sbjct 20262 GCATCAATTTCATCAACAAATACAATAGATGGCGCATTTTCTCGGGCAGTCTTGAATAAA 20321 Query 11690 TCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGGCAGAGCAC 11749 || ||||| || ||||||| || |||||||||||||| ||||| | | |||| || Sbjct 20322 TCACGAACTCTACTGGCACCTACCCCAACAAACATCTCAACAAATTCAGAACCAGA-AAC 20380 Query 11750 TGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGT 11808 | || ||||| || | |||||| || |||| |||| || || || || || Sbjct 20381 AGAATAAAATGGTACCCCAGCTTCACCTGCAGTGGCCTTCGCGATAAGAGTTTTACCAGT 20440 Query 11809 ACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACC 11853 ||| || ||||| ||||| || || || || || || || || Sbjct 20441 ACCGGGAGGACCCGAGAGAATAGCCCCACGAGGAATTTTTGCCCC 20485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628013316048000