Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq333 183 4e-41 seq1891 96.9 4e-15 >seq333 Length=169781 Score = 183 bits (202), Expect = 4e-41 Identities = 810/1274 (64%), Gaps = 19/1274 (1%) Strand=Plus/Minus Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398 |||||||||||||| ||||| || |||||||| || ||| | | || | ||||| Sbjct 51066 TTCAATGCTGGTACTCCAAGTCCACAAATGTCTTCGTGTTTCTTGGTTGCTATGAAGGAA 51007 Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458 || || || | ||||| || | || | | | |||||| ||| || ||| | ||| Sbjct 51006 GATTCCATTGATGGTATTTACGACACGTTAAAGACGTGTGCTTTAATTTCCAAGAGTGCT 50947 Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518 || ||||||||| | || || ||| || | | |||| | ||| |||| || || Sbjct 50946 GGTGGTATTGGGTTACATATTCATAATATCCGGGCCACTGGTTCTTATATTGCTGGTACC 50887 Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578 |||||| || | |||||||| || ||| || | || || ||| ||| || || ||| Sbjct 50886 AATGGTACTTCCAACGGTATTATCCCCATGGTTAGAGTTTTCAACAACACGGCTCGTTAT 50827 Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 || |||||| | || | | || ||| || | || | ||| | || || ||||| Sbjct 50826 GTTGATCAAGGT-GGTAACAAGAGACCAGGAGCTTTTGCCCTTTATTTAGAACCTTGGCA 50768 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 |||||||| | || ||| |||| | | || ||| | || || | Sbjct 50767 TGCGGATATTTTTGATTTCATTGATATTAGAAAAAATTCCGGTAAGGAAGAAATTAGAGC 50708 Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754 | ||| | ||| | || | |||||||| ||| | |||||||| ||||||| | | Sbjct 50707 TAGAGATTTATTCCCGGCGTTATGGATTCCGGATTTATTCATGAAACGAGTTGAACAAAA 50648 Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814 ||| | ||| || | |||| ||| | | || |||||| | | |||| ||||| Sbjct 50647 TGGAGAATGGACTTTGTTTTCACCAAATGAAGCTCCTGGTTTACCTGATGTTTATGGTGA 50588 Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCC 104874 || ||||||| | || || || || ||||||||| | ||| || | Sbjct 50587 TGAATTTGAAGAATTATATGAAAGATATGAAAGAGAAGGTCGTGGTACTAAAACTATCAA 50528 Query 104875 AGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACAT 104934 ||| | | ||| | |||| | | ||||||| || || ||||| |||| || Sbjct 50527 GGCTCAAAAATTATGGTATTCTATCTTGGAAGCTCAAACTGAAACAGGTACTCCATTTAT 50468 Query 104935 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 104994 | | || || || || |||||| |||| |||||||||||||| || || || || Sbjct 50467 GTTATATAAGGATGCTTGTAACAAAAAATCCAATCAAAAGAATTTAGGGGTTATTAAATC 50408 Query 104995 TTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 105054 ||| ||| | ||| ||||| |||||| | | | ||||| || |||||||| Sbjct 50407 TTCTAATTTATGTTGTGAAATTGTGGAATATTCTGCTCCTGATGAAGTTGCCGTGTGTAA 50348 Query 105055 CCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----A 105108 | || || || || | || | ||||| | || || || | ||| | Sbjct 50347 TTTAGCTTCTATTGCCATTCCATCATTCGTGGAAACTGATGAAAATCATTCTTGGTATAA 50288 Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168 || ||||||| | || || || || ||| || || || |||| |||||||||| Sbjct 50287 TTTTGAAAAATTACATGAGGTGACTAAAGTAGTTACTCGTAATTTAAATCGAGTTATTGA 50228 Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228 | | || | ||| || ||| || || || ||||||||| | | || | | Sbjct 50227 TCGTAACTATTATCCAGTTCCTGAAGCCAAGAATTCAAATATGAGAAATAGACCCGTGGC 50168 Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 105288 | ||||| |||||| | || |||| ||| || || | |||||||||| | Sbjct 50167 CTTGGGTGTCCAGGGTTTAGCTGATGCATTTATGAGTTTAAGATTACCATTTGATTCTCA 50108 Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348 ||||| |||| | ||| | || || || ||||| ||||| || ||| |||| | Sbjct 50107 AGAAGCTCGGGAATTAAATATTCAAATTTTCGAAACCATTTATCATGCTGCTGTTGAATC 50048 Query 105349 --GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406 ||| || || || | | || || ||||| ||| | || || || || ||| Sbjct 50047 CTCGGTT--GAATTAGCTCAAGAAGAAGGCGCATATCCAACTTACGAAGGATCACCTGCT 49990 Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA--CGACT 105464 || ||||| | | ||||||||| | |||||| | | ||| | || | || || | Sbjct 49989 TCTCAAGGATTATTGCAATTTGATTTATGGGAAAG-AAAACCTA-CTGAATTATGGGATT 49932 Query 105465 GGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTC 105524 |||| | | ||| || || | | ||| | | ||| | | | |||| Sbjct 49931 GGGATAGTTTGAAGCAAAAAATGGCCAAACATGGTTTAAGAAACTCATTATTGGTTGCTC 49872 Query 105525 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 105584 ||||||| || || || || ||||||||||||||||||||||||| |||||||| || | Sbjct 49871 CAATGCCTACGGCGTCAACATCACAAATCTTGGGTAATAATGAATGTTTTGAACCATATA 49812 Query 105585 CGACGAACATCTAT 105598 | | ||||| ||| Sbjct 49811 CTTCCAACATTTAT 49798 >seq1891 Length=76648 Score = 96.9 bits (106), Expect = 4e-15 Identities = 430/674 (64%), Gaps = 19/674 (3%) Strand=Plus/Minus Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262 || |||| || ||| | || |||| | | |||||||| ||||| || ||| | || | Sbjct 36615 TCCAATAAGAAACATAGACCTATTGCTATTGGTGTTCAAGGTCTTGCAGATTTGTT---T 36559 Query 105263 CTTTGTC---GCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 ||| | | | |||||||||| |||||| || | | || | |||||| Sbjct 36558 CTTGAACTAAGACTTTCATTTGATTCACCCGAAGCCAAACATTTAAACATTCAAATATTT 36499 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCA 105379 || || || || || ||||| ||||| | |||| |||||| ||||||||| Sbjct 36498 GAAACTATATACCATGCCGCGATTGAGCAATCTACAGAATTGGCATTTCGTGATGGTCCC 36439 Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 105439 |||||| | | ||| |||| ||| || || || || | |||||||||||||||||||| Sbjct 36438 TATGAATCTTATGAAGGTTGTCCTGCATCTCAGGGTATACTTCAATTTGATATGTGGGAT 36379 Query 105440 GGTGAGACCAAGCTTC-----ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGA 105494 | | ||| |||| | |||| ||||| | | || || |||||| | Sbjct 36378 CAT-AAACC-GTCTTCTTTGTATGACGATTGGGATACCTTAAAACAAAATATCAAGAACT 36321 Query 105495 AGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCT 105554 || | | || | || | || || ||||| || || ||||| |||||||| Sbjct 36320 TTGGGTTAAGGAATTCCTTACTTGTTGCACCGATGCCCACGGCTTCCACTTCACAAATCC 36261 Query 105555 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCG 105614 | || ||||||||| |||||||| || || | ||| | ||| | || || Sbjct 36260 TTGGATTTAATGAATGTTTTGAACCATATACTTCTAACTTGTATACCCGTCGAGTACTTT 36201 Query 105615 CGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCT 105674 | || || ||| | || || || || | | | || | | || | || | | Sbjct 36200 CTGGGGAATTTCAAGTGGTTAATAAATATTTAATTAAAGATTTAATTGATTTGGGATTAT 36141 Query 105675 GG--TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGT 105732 || | |||| ||||| || || | || ||| || ||||||||||||| Sbjct 36140 GGAATTCAAG--TATGAGAAATAAAATTATTTTAGAAAATGGATCAATTCAAAATATTGC 36083 Query 105733 GGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA 105792 ||| ||| ||||||||| | || ||| ||||| |||||||| | |||| Sbjct 36082 TAGTATCCCACCTGAAATTAAACAATTATACAAGACAGTATGGGAAATAAGTCAAAAGGT 36023 Query 105793 TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCT 105852 | | ||||| ||||| | || || ||| || ||||||||| ||||||||||| | Sbjct 36022 TATAATTGATATGGCTTCTGACCGAGGTAAATTTATTGATCAACTGCAAAGTATGAA--T 35965 Query 105853 CTTCATGGAAAGTC 105866 ||||| |||||| Sbjct 35964 ATTCATTTAAAGTC 35951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583243447991200