Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq333 183 4e-41
seq1891 96.9 4e-15
>seq333
Length=169781
Score = 183 bits (202), Expect = 4e-41
Identities = 810/1274 (64%), Gaps = 19/1274 (1%)
Strand=Plus/Minus
Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398
|||||||||||||| ||||| || |||||||| || ||| | | || | |||||
Sbjct 51066 TTCAATGCTGGTACTCCAAGTCCACAAATGTCTTCGTGTTTCTTGGTTGCTATGAAGGAA 51007
Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458
|| || || | ||||| || | || | | | |||||| ||| || ||| | |||
Sbjct 51006 GATTCCATTGATGGTATTTACGACACGTTAAAGACGTGTGCTTTAATTTCCAAGAGTGCT 50947
Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518
|| ||||||||| | || || ||| || | | |||| | ||| |||| || ||
Sbjct 50946 GGTGGTATTGGGTTACATATTCATAATATCCGGGCCACTGGTTCTTATATTGCTGGTACC 50887
Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
|||||| || | |||||||| || ||| || | || || ||| ||| || || |||
Sbjct 50886 AATGGTACTTCCAACGGTATTATCCCCATGGTTAGAGTTTTCAACAACACGGCTCGTTAT 50827
Query 104579 GTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
|| |||||| | || | | || ||| || | || | ||| | || || |||||
Sbjct 50826 GTTGATCAAGGT-GGTAACAAGAGACCAGGAGCTTTTGCCCTTTATTTAGAACCTTGGCA 50768
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
|||||||| | || ||| |||| | | || ||| | || || |
Sbjct 50767 TGCGGATATTTTTGATTTCATTGATATTAGAAAAAATTCCGGTAAGGAAGAAATTAGAGC 50708
Query 104695 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 104754
| ||| | ||| | || | |||||||| ||| | |||||||| ||||||| | |
Sbjct 50707 TAGAGATTTATTCCCGGCGTTATGGATTCCGGATTTATTCATGAAACGAGTTGAACAAAA 50648
Query 104755 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGA 104814
||| | ||| || | |||| ||| | | || |||||| | | |||| |||||
Sbjct 50647 TGGAGAATGGACTTTGTTTTCACCAAATGAAGCTCCTGGTTTACCTGATGTTTATGGTGA 50588
Query 104815 GGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCC 104874
|| ||||||| | || || || || ||||||||| | ||| || |
Sbjct 50587 TGAATTTGAAGAATTATATGAAAGATATGAAAGAGAAGGTCGTGGTACTAAAACTATCAA 50528
Query 104875 AGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACAT 104934
||| | | ||| | |||| | | ||||||| || || ||||| |||| ||
Sbjct 50527 GGCTCAAAAATTATGGTATTCTATCTTGGAAGCTCAAACTGAAACAGGTACTCCATTTAT 50468
Query 104935 GCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAG 104994
| | || || || || |||||| |||| |||||||||||||| || || || ||
Sbjct 50467 GTTATATAAGGATGCTTGTAACAAAAAATCCAATCAAAAGAATTTAGGGGTTATTAAATC 50408
Query 104995 TTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAA 105054
||| ||| | ||| ||||| |||||| | | | ||||| || ||||||||
Sbjct 50407 TTCTAATTTATGTTGTGAAATTGTGGAATATTCTGCTCCTGATGAAGTTGCCGTGTGTAA 50348
Query 105055 CCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGA-GACAAAGACATTTG-----A 105108
| || || || || | || | ||||| | || || || | ||| |
Sbjct 50347 TTTAGCTTCTATTGCCATTCCATCATTCGTGGAAACTGATGAAAATCATTCTTGGTATAA 50288
Query 105109 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168
|| ||||||| | || || || || ||| || || || |||| ||||||||||
Sbjct 50287 TTTTGAAAAATTACATGAGGTGACTAAAGTAGTTACTCGTAATTTAAATCGAGTTATTGA 50228
Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228
| | || | ||| || ||| || || || ||||||||| | | || | |
Sbjct 50227 TCGTAACTATTATCCAGTTCCTGAAGCCAAGAATTCAAATATGAGAAATAGACCCGTGGC 50168
Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 105288
| ||||| |||||| | || |||| ||| || || | |||||||||| |
Sbjct 50167 CTTGGGTGTCCAGGGTTTAGCTGATGCATTTATGAGTTTAAGATTACCATTTGATTCTCA 50108
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348
||||| |||| | ||| | || || || ||||| ||||| || ||| |||| |
Sbjct 50107 AGAAGCTCGGGAATTAAATATTCAAATTTTCGAAACCATTTATCATGCTGCTGTTGAATC 50048
Query 105349 --GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCT 105406
||| || || || | | || || ||||| ||| | || || || || |||
Sbjct 50047 CTCGGTT--GAATTAGCTCAAGAAGAAGGCGCATATCCAACTTACGAAGGATCACCTGCT 49990
Query 105407 TCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTA--CGACT 105464
|| ||||| | | ||||||||| | |||||| | | ||| | || | || || |
Sbjct 49989 TCTCAAGGATTATTGCAATTTGATTTATGGGAAAG-AAAACCTA-CTGAATTATGGGATT 49932
Query 105465 GGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTC 105524
|||| | | ||| || || | | ||| | | ||| | | | ||||
Sbjct 49931 GGGATAGTTTGAAGCAAAAAATGGCCAAACATGGTTTAAGAAACTCATTATTGGTTGCTC 49872
Query 105525 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 105584
||||||| || || || || ||||||||||||||||||||||||| |||||||| || |
Sbjct 49871 CAATGCCTACGGCGTCAACATCACAAATCTTGGGTAATAATGAATGTTTTGAACCATATA 49812
Query 105585 CGACGAACATCTAT 105598
| | ||||| |||
Sbjct 49811 CTTCCAACATTTAT 49798
>seq1891
Length=76648
Score = 96.9 bits (106), Expect = 4e-15
Identities = 430/674 (64%), Gaps = 19/674 (3%)
Strand=Plus/Minus
Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT 105262
|| |||| || ||| | || |||| | | |||||||| ||||| || ||| | || |
Sbjct 36615 TCCAATAAGAAACATAGACCTATTGCTATTGGTGTTCAAGGTCTTGCAGATTTGTT---T 36559
Query 105263 CTTTGTC---GCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319
||| | | | |||||||||| |||||| || | | || | ||||||
Sbjct 36558 CTTGAACTAAGACTTTCATTTGATTCACCCGAAGCCAAACATTTAAACATTCAAATATTT 36499
Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCA 105379
|| || || || || ||||| ||||| | |||| |||||| |||||||||
Sbjct 36498 GAAACTATATACCATGCCGCGATTGAGCAATCTACAGAATTGGCATTTCGTGATGGTCCC 36439
Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 105439
|||||| | | ||| |||| ||| || || || || | ||||||||||||||||||||
Sbjct 36438 TATGAATCTTATGAAGGTTGTCCTGCATCTCAGGGTATACTTCAATTTGATATGTGGGAT 36379
Query 105440 GGTGAGACCAAGCTTC-----ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGA 105494
| | ||| |||| | |||| ||||| | | || || |||||| |
Sbjct 36378 CAT-AAACC-GTCTTCTTTGTATGACGATTGGGATACCTTAAAACAAAATATCAAGAACT 36321
Query 105495 AGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCT 105554
|| | | || | || | || || ||||| || || ||||| ||||||||
Sbjct 36320 TTGGGTTAAGGAATTCCTTACTTGTTGCACCGATGCCCACGGCTTCCACTTCACAAATCC 36261
Query 105555 TGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCG 105614
| || ||||||||| |||||||| || || | ||| | ||| | || ||
Sbjct 36260 TTGGATTTAATGAATGTTTTGAACCATATACTTCTAACTTGTATACCCGTCGAGTACTTT 36201
Query 105615 CGGGAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCT 105674
| || || ||| | || || || || | | | || | | || | || | |
Sbjct 36200 CTGGGGAATTTCAAGTGGTTAATAAATATTTAATTAAAGATTTAATTGATTTGGGATTAT 36141
Query 105675 GG--TCCAAGGATATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGT 105732
|| | |||| ||||| || || | || ||| || |||||||||||||
Sbjct 36140 GGAATTCAAG--TATGAGAAATAAAATTATTTTAGAAAATGGATCAATTCAAAATATTGC 36083
Query 105733 GGATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGA 105792
||| ||| ||||||||| | || ||| ||||| |||||||| | ||||
Sbjct 36082 TAGTATCCCACCTGAAATTAAACAATTATACAAGACAGTATGGGAAATAAGTCAAAAGGT 36023
Query 105793 TGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCT 105852
| | ||||| ||||| | || || ||| || ||||||||| ||||||||||| |
Sbjct 36022 TATAATTGATATGGCTTCTGACCGAGGTAAATTTATTGATCAACTGCAAAGTATGAA--T 35965
Query 105853 CTTCATGGAAAGTC 105866
||||| ||||||
Sbjct 35964 ATTCATTTAAAGTC 35951
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583243447991200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |