Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq1836 132 5e-26 seq481 118 1e-21 seq221 107 2e-18 seq333 89.7 6e-13 >seq1836 Length=79629 Score = 132 bits (146), Expect = 5e-26 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| | || || ||||||||||| | || ||||| || | Sbjct 57117 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57058 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | || |||| || || |||||||| || ||||| || ||||| Sbjct 57057 GACACCATTGACAATGTTAAATCTAAGATCCAAGACAAGGAAGGTATTCCACCTGACCAA 56998 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | |||||||||||||||||||| | || || | | | || || | || || ||| Sbjct 56997 CAAAGATTAATTTTTGCTGGTAAGCAATTAGAAGACGGTAGAACTTTATCTGATTACAAT 56938 Query 27586 GTCCAAAAGGAATCCACT 27603 ||||||||||||| ||| Sbjct 56937 ATCCAAAAGGAATCTACT 56920 Score = 123 bits (136), Expect = 3e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| | || || ||||||||||| | || ||||| || | Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | ||||| || |||||||| || ||||| |||||||| Sbjct 57285 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACCAA 57226 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| |||||||| | || || | | | || || | ||||| || Sbjct 57225 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 57166 Query 27586 GTCCAAAAGGAATCCACT 27603 ||||||||||||||||| Sbjct 57165 ATCCAAAAGGAATCCACT 57148 >seq481 Length=384 Score = 118 bits (130), Expect = 1e-21 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| | || || ||||||||||| | || ||||| || | Sbjct 208 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 149 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| || | ||| | ||||| || |||||||| || ||||| || ||||| Sbjct 148 GACACTATTGACAACGTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAA 89 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || | | |||||||| |||||||| | || || | | | || || | ||||| || Sbjct 88 CAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAAC 29 Query 27586 GTCCAAAAGGAATCCACT 27603 ||||||||||||||||| Sbjct 28 ATCCAAAAGGAATCCACT 11 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 27484 AAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCT 27543 ||| | ||||| || |||||||| || ||||| || ||||| || | | |||||||| Sbjct 358 AAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCTGACCAACAAAGATTGATTTTTGCC 299 Query 27544 GGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACT 27603 |||||||| | || || | | | || || | ||||| || ||||||||||||||||| Sbjct 298 GGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACAACATCCAAAAGGAATCCACT 239 >seq221 Length=38424 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || ||||| | || || ||||| |||||| | || || || || Sbjct 37881 AATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCCTC 37822 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||||| ||| | || | || ||||| || ||||| || ||||| || || || Sbjct 37821 CGACACCATTGATAATGTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTGATCA 37762 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 || | |||| ||||||||||| ||| | || |||| | | ||| || || || || Sbjct 37761 ACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATTACAA 37702 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 | ||||||| ||||| ||| | ||| | || ||| Sbjct 37701 TATCCAAAAAGAATCTACTTTACATTTGGTTTTG 37668 >seq333 Length=169781 Score = 89.7 bits (98), Expect = 6e-13 Identities = 272/416 (65%), Gaps = 11/416 (3%) Strand=Plus/Plus Query 81328 ATGTCCGCATGCCATGGCTCCAGATACACGGC----GATC--GACCCCTTGCGACGGCCA 81381 || ||||||||||| || || | ||| | ||| | || | | |||| | ||| Sbjct 50759 ATATCCGCATGCCAAGGTTCTAAATAAAGGGCAAAAGCTCCTGGTCTCTTGTTA---CCA 50815 Query 81382 CCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAACATAGGGATGATACCATCT 81441 || || | || ||||| || || ||| || || | | ||| ||||| ||||| | Sbjct 50816 CCTTGATCAACATAACGAGCCGTGTTGTTGAAAACTCTAACCATGGGGATAATACCGTTG 50875 Query 81442 GACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGCACCTTGCTGAT-TGAAAG 81500 || ||| || ||||| | ||| || || |||| || | || || || || Sbjct 50876 GAAGTACCATTGGTACCAGCAATATAAGAACCAGTGGCCCGGATATTATGAATATGTAA- 50934 Query 81501 ACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTCATGGTCTCATAAATTCC 81560 || || ||||| | | ||| ||||| ||||||| || | || || ||||| || Sbjct 50935 CCCAATACCACCAGCACTCTTGGAAATTAAAGCACACGTCTTTAACGTGTCGTAAATACC 50994 Query 81561 CTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGACATCTGAGGGCTTTTTGA 81620 || ||| ||||| ||||| ||| ||||||||| ||||| || || ||| | Sbjct 50995 ATCAATGGAATCTTCCTTCATAGCAACCAAGAAACACGAAGACATTTGTGGACTTGGAGT 51054 Query 81621 GCCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAACGGTTTGACATCAGGTCATA 81680 || |||||||| | || |||| | | || | || || | ||||| | | ||| Sbjct 51055 ACCAGCATTGAATAACGTGGGGGACCCATGGGTAAAGTATTTTTGAGACATTAAATTATA 51114 Query 81681 GGTTTCCTTGACGCGTGGAATATCGTCACCGTGAATACCGATAGCTACACGCATAA 81736 | ||| | || || |||||||| ||||| |||||||| ||||| || | ||||| Sbjct 51115 TGATTCAATTACTCGGGGAATATCTTCACCATGAATACCAATAGCAACTCTCATAA 51170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570293433265600