Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq1836 93.3 3e-14
seq481 86.0 4e-12
>seq1836
Length=79629
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| || | |||| |||||||| ||||| || || ||
Sbjct 57119 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 57178
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| ||||||| | || ||||||||||| || || | |||||||| || ||
Sbjct 57179 AAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGA 57238
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | || ||| | ||| ||||| || ||
Sbjct 57239 ATACCTTCCTTGTCTTGGAT-TTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAAC 57297
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || || ||||| ||||| || || || || || |||||
Sbjct 57298 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345
>seq481
Length=384
Score = 86.0 bits (94), Expect = 4e-12
Identities = 146/209 (70%), Gaps = 2/209 (1%)
Strand=Plus/Plus
Query 34499 CCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAA 34558
|||| || | |||| |||||||| ||||| || || || | |||| ||||||| |
Sbjct 1 CCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTA 60
Query 34559 GTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGA 34618
|| ||||||||||| || || | |||||||| || || | || ||||||||| ||
Sbjct 61 ACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 120
Query 34619 TCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677
| ||| | || ||| | ||| ||||| || ||||| | ||| || || |||
Sbjct 121 T-TTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTA 179
Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| ||||| || || || || || |||||
Sbjct 180 CCAGTTAAAGTCTTAACGAAGATTTGCAT 208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314720470874540
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |