Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1836 93.3 3e-14 seq481 86.0 4e-12 >seq1836 Length=79629 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || ||||| | | ||| ||||| || | |||| |||||||| ||||| || || || Sbjct 57119 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 57178 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 | |||| ||||||| | || ||||||||||| || || | |||||||| || || Sbjct 57179 AAAGTTCTACCGTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGA 57238 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | || ||||||||| ||| ||| | || ||| | ||| ||||| || || Sbjct 57239 ATACCTTCCTTGTCTTGGAT-TTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAAC 57297 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||| | ||| || || ||||| ||||| || || || || || ||||| Sbjct 57298 TTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 >seq481 Length=384 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 34499 CCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAA 34558 |||| || | |||| |||||||| ||||| || || || | |||| ||||||| | Sbjct 1 CCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTA 60 Query 34559 GTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGA 34618 || ||||||||||| || || | |||||||| || || | || ||||||||| || Sbjct 61 ACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 120 Query 34619 TCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 | ||| | || ||| | ||| ||||| || ||||| | ||| || || ||| Sbjct 121 T-TTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTA 179 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| || || || || || ||||| Sbjct 180 CCAGTTAAAGTCTTAACGAAGATTTGCAT 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314720470874540