Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq221 95.1 9e-15
seq1836 84.2 2e-11
>seq221
Length=38424
Score = 95.1 bits (104), Expect = 9e-15
Identities = 153/218 (70%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 27787 AAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGC 27846
|||||||||||||| || || || | ||||| || ||||| | || |||||| |
Sbjct 37883 AAAATGCAAATTTTCGTTAAGACCTTAACTGGTAAGACCATTACTTTGGAAGTCGAATCC 37824
Query 27847 ACCGACG--ATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGG 27904
||||| || | ||| |||||| || || || || |||||| |||| |
Sbjct 37823 TCCGACACCATTGATAAT--GTCAAATCCAAGATTCAAGATAAGGAAGGTATTCCACCTG 37766
Query 27905 AGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATT 27964
| || ||| | ||||| ||||| || ||||||||||| || | | | ||| ||||
Sbjct 37765 ATCAACAAAGATTAATCTTTGCTGGTAAACAATTGGAAGATGGTAGAACCTTAAGTGATT 37706
Query 27965 ACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002
|||| ||||||||||| ||||| ||||||||||||
Sbjct 37705 ACAATATCCAAAAAGAATCTACTTTACATTTGGTTTTG 37668
>seq1836
Length=79629
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
|||||||| || || || ||| | ||||| || |||||| | || || ||| |
Sbjct 57345 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAGACTATTACCTTAGAAGTTGAATCTTCT 57286
Query 27850 GACGATGT--ACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
||| | | |||| ||||| ||||| ||||| |||||| |||| || |
Sbjct 57285 GACACTATTGACAAC--GTCAAGTCCAAAATCCAAGACAAGGAAGGTATTCCACCAGACC 57228
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
| ||| | || ||||||||||| || || || || |||| | | || || || ||||
Sbjct 57227 AACAAAGATTGATTTTTGCCGGTAAGCAGTTAGAAGACGGTAGAACTTTATCTGACTACA 57168
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||||||||| || |||||| || ||||||||| | ||| | || ||
Sbjct 57167 ACATCCAAAAGGAATCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 57119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355852077766260
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |