Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq1836 123 6e-23
seq481 120 7e-22
seq221 120 7e-22
>seq1836
Length=79629
Score = 123 bits (136), Expect = 6e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958
||||| || | ||| | ||| || || |||||||| || ||||| | | || || ||
Sbjct 56902 TCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTACC 56961
Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018
||||| | ||||| || || || || | | |||||||||||| |||| ||||||||
Sbjct 56962 GTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 57021
Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078
||| |||||||| ||| || || || ||||||||||| |||||| || | || ||
Sbjct 57022 GTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 57081
Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| || || | |||||| || || | |||||
Sbjct 57082 AGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117
Score = 116 bits (128), Expect = 9e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | |||||| || ||||||||||| || || | | || || || ||||| | |||
Sbjct 57142 GTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTG 57201
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || || || | | ||||||||| || |||| ||||||||||| ||||| ||
Sbjct 57202 CTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGATTTT 57261
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || |||||||| |||||| || | || || ||||| || ||
Sbjct 57262 GGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGT 57321
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| || || | |||||
Sbjct 57322 TAAAGTCTTAACGAAGATTTGCAT 57345
>seq481
Length=384
Score = 120 bits (132), Expect = 7e-22
Identities = 149/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | |||||| || ||||||||||| || || | | || || || ||||| | |||
Sbjct 5 GTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTG 64
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || || || | | |||||||||||| |||| ||||||||||| ||||| ||
Sbjct 65 CTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTT 124
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090
|| ||||| || || |||||||| |||||| || | || || ||||| || ||
Sbjct 125 GGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGT 184
Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114
| |||||| || || | |||||
Sbjct 185 TAAAGTCTTAACGAAGATTTGCAT 208
Score = 98.7 bits (108), Expect = 2e-15
Identities = 110/147 (75%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970
||| | |||||| || ||||||||||| || || | | || || || ||||| | |||
Sbjct 233 GTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTG 292
Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030
||| || || || || | | |||||||||||| |||| ||||||||||| ||||| ||
Sbjct 293 CTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTT 352
Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGA 211057
|| ||||| || || ||||||||
Sbjct 353 GGACTTGACGTTGTCAATAGTGTCAGA 379
>seq221
Length=38424
Score = 120 bits (132), Expect = 7e-22
Identities = 147/201 (73%), Gaps = 0/201 (0%)
Strand=Plus/Plus
Query 210917 AGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCC 210976
||| || ||||||||||| || ||||| | ||| || |||||||||| || || ||
Sbjct 37683 AGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCATCTTCCAATTGTTTACC 37742
Query 210977 TGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTT 211036
|| ||||| | | |||||| ||||| |||| |||||||| || || ||||| |||
Sbjct 37743 AGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGAATCTTGGATTT 37802
Query 211037 CACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGT 211096
|| || || |||||||| ||| ||| || || | ||| || ||||| || || | ||
Sbjct 37803 GACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATGGTCTTACCAGTTAAGGT 37862
Query 211097 CTTTACAAACACCTGCATTTT 211117
||| || || | ||||||||
Sbjct 37863 CTTAACGAAAATTTGCATTTT 37883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159116653108700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |