Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1836 165 2e-35
seq481 152 1e-31
seq221 147 5e-30
seq777 102 2e-16
>seq1836
Length=79629
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| | ||| ||||| ||||||| ||||||||| | |||||||| || ||||||| ||
Sbjct 56914 GTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTACCGTCTTCTAATTG 56973
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| ||||| || || | || ||||||||| || ||||||||||||||||||||||||||
Sbjct 56974 CTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTT 57033
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||| || |||||||| || | ||| || ||||| || || ||||| || ||
Sbjct 57034 AGATTTAACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGT 57093
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| | ||||||
Sbjct 57094 TAAAGTCTTAACGAAGATTTGCAT 57117
Score = 156 bits (172), Expect = 1e-32
Identities = 164/216 (76%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | ||||||||| ||||||| ||||| || | |||||||| ||
Sbjct 57130 TCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 57189
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| |||||| || || || || | || ||||||||| || ||||||||||||||
Sbjct 57190 GTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTT 57249
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||||||| || ||| || || || ||||| || | ||| || ||||| || ||
Sbjct 57250 GTCTTGGATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAAT 57309
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || || ||||| || | ||| | ||||||
Sbjct 57310 AGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57345
>seq481
Length=384
Score = 152 bits (168), Expect = 1e-31
Identities = 156/204 (76%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569
||| | ||||||||| ||||||| ||||| || | |||||||| || ||||||| |||
Sbjct 5 GTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTG 64
Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629
||| || || || || | || ||||||||| || ||||||||||||||||||||||| ||
Sbjct 65 CTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTT 124
Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
||| || || || ||||| || | ||| || ||||| || || ||||| || ||
Sbjct 125 GGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGT 184
Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713
||||| || | ||| | ||||||
Sbjct 185 TAAAGTCTTAACGAAGATTTGCAT 208
Score = 122 bits (134), Expect = 2e-22
Identities = 106/132 (80%), Gaps = 0/132 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | ||| | ||||||||| ||||||| ||||| || | |||||||| ||
Sbjct 221 TCTCAAAACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACC 280
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||||||| |||||| || || || || | || ||||||||| || ||||||||||||||
Sbjct 281 GTCTTCTAACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTT 340
Query 225618 GTCTTGGATCTT 225629
||||||||| ||
Sbjct 341 GTCTTGGATTTT 352
>seq221
Length=38424
Score = 147 bits (162), Expect = 5e-30
Identities = 164/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | || | ||| ||||||||||||| ||||||||| || ||||| ||
Sbjct 37665 TCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACC 37724
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
|||||| | || || ||||| ||||| | || |||||| || || ||||||||||||||
Sbjct 37725 ATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTT 37784
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||| ||||| || ||| || |||||||| |||| ||| || || || || ||
Sbjct 37785 ATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAAT 37844
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716
||||| || || || || || | ||| | |||||||||
Sbjct 37845 GGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATTTT 37883
>seq777
Length=146766
Score = 102 bits (112), Expect = 2e-16
Identities = 88/109 (81%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 4470 GAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACC 4529
||| ||||||||||||||||| || ||||| || || || ||||||||||| ||||||||
Sbjct 81755 GAAAATTTGACCATCAGTAATGGAAATAACGTTAGTTGGAATATAAGCAGAGACATCACC 81696
Query 4530 TGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAA 4578
|||| ||||| | ||| ||||| || |||| || ||||| || |||
Sbjct 81695 ACCTTGAGTTTCAATAACTGGTAAAGCAGTTAAAGAACCACCGCCTAAA 81647
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192494835251720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |