Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq1836 102 7e-17 seq221 87.8 1e-12 >seq1836 Length=79629 Score = 102 bits (112), Expect = 7e-17 Identities = 163/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Plus Query 101007 TATTG-CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAA 101065 ||||| || |||| ||||||||| |||| ||| ||||| ||||| ||||| ||||||||| Sbjct 56885 TATTGACCACCTCTCAATCTTAAAACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAA 56944 Query 101066 TCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCT 101125 || | | |||| | ||||| ||||| || || ||| | || | ||||||||||| Sbjct 56945 TCAGATAAAGTTCTACCGTCTTCTAATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCA 57004 Query 101126 ACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGAC 101185 || | ||||| ||||| || || ||| |||| | | | || || | || Sbjct 57005 GGTGGAATACCTTCCTTGTCTTGGATCTTAGATTTAACATTGTCAATGGTGTCAGAAGAT 57064 Query 101186 GTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||||||||| || || || || || |||| || |||||||| Sbjct 57065 TCAACTTCTAAGGTAATAGTCTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 57117 >seq221 Length=38424 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 101012 CCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCC 101071 || |||| ||||| || |||| || ||||| ||||||||||| ||||||||||| Sbjct 37654 CCACCTCTTAATCTCAAAACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTT 37713 Query 101072 ATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGC 101131 | ||| | ||||||||||||||| || ||| | || | |||||||| || || Sbjct 37714 AAGGTTCTACCATCTTCCAATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGA 37773 Query 101132 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTT 101191 | ||||| || || ||| || ||| |||| | | || || | ||| | Sbjct 37774 ATACCTTCCTTATCTTGAATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACT 37833 Query 101192 TCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCATT 101239 || | ||||| || || || || || || |||| |||||||||||| Sbjct 37834 TCCAAAGTAATGGTCTTACCAGTTAAGGTCTTAACGAAAATTTGCATT 37881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409648917276420