Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq333 325 3e-84
>seq333
Length=169781
Score = 325 bits (360), Expect = 3e-84
Identities = 614/896 (69%), Gaps = 13/896 (1%)
Strand=Plus/Plus
Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306
||||||| | |||| || ||||| |||| |||||| ||||||||||| || || ||||
Sbjct 13654 AACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAA 13713
Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTA 4365
|||||||| ||||| |||||||| ||||||||| | || || | || || || |
Sbjct 13714 GGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATTAC-CAA 13772
Query 4366 GAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425
||| || | |||| ||||||||||| || | ||| || | ||| | | | |||| |
Sbjct 13773 AAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCA 13832
Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485
| || | || || || |||| || | || ||| | || | ||| |||| || ||||
Sbjct 13833 TACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTT 13892
Query 4486 CTGTGATTATATCTTT-TATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544
| || || ||||| | | ||| | ||| |||| ||| | |||| ||
Sbjct 13893 CAACAATAAT-TCTTTGCACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAAC 13951
Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604
| ||| ||||||||| ||| || ||||| ||||| ||| | ||| ||||| || |||
Sbjct 13952 ATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTT 14011
Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664
||||| |||||||| ||||| || || | ||| || || | ||||| || ||| ||||
Sbjct 14012 AATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAG 14071
Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724
|| || ||||| | || ||||| || ||||||| | | || | || ||
Sbjct 14072 AAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATCG 14131
Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784
|||||||| || |||||||| || || || || || ||||| || | || ||
Sbjct 14132 GCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCA 14191
Query 4785 TTAAAT---AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTA 4841
| |||| |||| | || || | || || | || |||||| ||||| | || |
Sbjct 14192 TCAAATAAAAATTCAGCTTCTTGA---GGATCCTTAACATAAGTATCTATCAAAAGAGAA 14248
Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901
|| | ||||||||| || |||| || || || || || || || | |||||||
Sbjct 14249 TAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCA 14308
Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961
| ||||||||||| ||| || |||| ||||| ||||| || |||||||| |||
Sbjct 14309 GGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAA 14368
Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTT 5018
|| ||||| || || || || | || || || || |||| | | || | | ||
Sbjct 14369 GCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTG 14428
Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCC 5078
||||| | | | ||||| ||| ||||||| | ||||||| | ||||| || || |||||
Sbjct 14429 TTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCA 14488
Query 5079 GCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134
|||||||| ||||| ||| || ||| |||| ||| || | ||| ||||||||
Sbjct 14489 GCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCT 14544
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427037212892540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |