Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq333 325 3e-84 >seq333 Length=169781 Score = 325 bits (360), Expect = 3e-84 Identities = 614/896 (69%), Gaps = 13/896 (1%) Strand=Plus/Plus Query 4247 AACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAA 4306 ||||||| | |||| || ||||| |||| |||||| ||||||||||| || || |||| Sbjct 13654 AACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGCTAA 13713 Query 4307 CGAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTA-ATGTTTTTCACACTTTA 4365 |||||||| ||||| |||||||| ||||||||| | || || | || || || | Sbjct 13714 GGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATATACCTTCTTATTAC-CAA 13772 Query 4366 GAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAA 4425 ||| || | |||| ||||||||||| || | ||| || | ||| | | | |||| | Sbjct 13773 AAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAGTTCA 13832 Query 4426 TTCCAATTAATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTT 4485 | || | || || || |||| || | || ||| | || | ||| |||| || |||| Sbjct 13833 TACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACAGCTT 13892 Query 4486 CTGTGATTATATCTTT-TATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAAT 4544 | || || ||||| | | ||| | ||| |||| ||| | |||| || Sbjct 13893 CAACAATAAT-TCTTTGCACGATTTCTGGATCAGGTCTATTCTTTAAATGGGCAAATAAC 13951 Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 | ||| ||||||||| ||| || ||||| ||||| ||| | ||| ||||| || ||| Sbjct 13952 ATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAGAAAGTT 14011 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAG 4664 ||||| |||||||| ||||| || || | ||| || || | ||||| || ||| |||| Sbjct 14012 AATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCACTAAAG 14071 Query 4665 AATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCT 4724 || || ||||| | || ||||| || ||||||| | | || | || || Sbjct 14072 AAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCCTTATCG 14131 Query 4725 TTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCG 4784 |||||||| || |||||||| || || || || || ||||| || | || || Sbjct 14132 GCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGAATTGCA 14191 Query 4785 TTAAAT---AATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTA 4841 | |||| |||| | || || | || || | || |||||| ||||| | || | Sbjct 14192 TCAAATAAAAATTCAGCTTCTTGA---GGATCCTTAACATAAGTATCTATCAAAAGAGAA 14248 Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 || | ||||||||| || |||| || || || || || || || | ||||||| Sbjct 14249 TAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCTTCA 14308 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 | ||||||||||| ||| || |||| ||||| ||||| || |||||||| ||| Sbjct 14309 GGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCAGAA 14368 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTT 5018 || ||||| || || || || | || || || || |||| | | || | | || Sbjct 14369 GCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTATTG 14428 Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCC 5078 ||||| | | | ||||| ||| ||||||| | ||||||| | ||||| || || ||||| Sbjct 14429 TTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCTTCA 14488 Query 5079 GCTTTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACAAATCT 5134 |||||||| ||||| ||| || ||| |||| ||| || | ||| |||||||| Sbjct 14489 GCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCT 14544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427037212892540