Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq221 113 1e-19
seq1836 105 2e-17
seq481 105 2e-17
>seq221
Length=38424
Score = 113 bits (124), Expect = 1e-19
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960
||| | |||||| ||||||||||| |||||||| ||| ||||| |||||||| |
Sbjct 37677 ATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCATCTTCCAATTG 37736
Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020
||| || || ||||| | || || || || | | || |||||||| |||||||| ||
Sbjct 37737 TTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGAATCTT 37796
Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080
||||||| | || | | |||| || || ||||| | |||||| || || || ||
Sbjct 37797 GGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATGGTCTTACCAGT 37856
Query 152081 GAGAGTCTTCACGAAGACCTGCATTTT 152107
| ||||| ||||| | ||||||||
Sbjct 37857 TAAGGTCTTAACGAAAATTTGCATTTT 37883
>seq1836
Length=79629
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || || |||||||||||||| || | ||||||||| || |||||||
Sbjct 57139 CAAG-TGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTA 57197
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| ||||| || || | || || ||||| | | || |||||||| ||||| |
Sbjct 57198 ACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGGA 57257
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| ||||| | || | |||| ||| || ||||| | |||||||| || |
Sbjct 57258 TTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTAC 57317
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | |||||| ||||||| |||||
Sbjct 57318 CAGTTAAAGTCTTAACGAAGATTTGCAT 57345
>seq481
Length=384
Score = 105 bits (116), Expect = 2e-17
Identities = 149/208 (72%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || | ||| || || |||||||||||||| || | ||||||||| || |||||||
Sbjct 2 CAAG-TGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTA 60
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
|| ||||| || || | || || ||||| | | || |||||||| ||||| |
Sbjct 61 ACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGA 120
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
|||| ||||| | || | |||| ||| || ||||| | |||||||| || |
Sbjct 121 TTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTAC 180
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | |||||| ||||||| |||||
Sbjct 181 CAGTTAAAGTCTTAACGAAGATTTGCAT 208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153785615676980
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |