Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq481 168 1e-36 seq1836 165 2e-35 seq221 161 2e-34 seq2246 100 6e-16 >seq481 Length=384 Score = 168 bits (186), Expect = 1e-36 Identities = 159/203 (78%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| ||| ||| ||||||||||||||||||| | || | || || |||| || Sbjct 6 TGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGC 65 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || |||||||| ||||| | |||||||||| |||||||| |||||||||||||| || Sbjct 66 TTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTG 125 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 | || ||| | || |||||||| |||| ||| ||||| | || || |||||||| || Sbjct 126 GACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTT 185 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 |||||||||||||| || ||||| Sbjct 186 AAAGTCTTAACGAAGATTTGCAT 208 Score = 122 bits (134), Expect = 2e-22 Identities = 121/157 (77%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| ||| ||||||||||||||||||| | || | || || ||| Sbjct 228 ACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCT 287 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || |||||||| ||||| | |||||||||| |||||||| |||||||||||| Sbjct 288 AACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 347 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTT 283047 || || | || ||| | || |||||||| |||| || Sbjct 348 ATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATT 384 >seq1836 Length=79629 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| ||| ||| ||||||||||||||||||| | || | || || ||| Sbjct 57137 ACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCT 57196 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | || || |||||||| ||||| | ||||||||| |||||||| |||||||||||| Sbjct 57197 AACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGG 57256 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 || || | || ||| | || |||||||| |||| ||| ||||| | || || |||||| Sbjct 57257 ATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTA 57316 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || |||||||||||||| || ||||| Sbjct 57317 CCAGTTAAAGTCTTAACGAAGATTTGCAT 57345 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| ||||| || ||| |||||||| ||||| |||| | || | || || ||| Sbjct 56909 ACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTACCGTCTTCT 56968 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | ||| || || ||||| || || | |||||||||| |||||||| |||||||||||| Sbjct 56969 AATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 57028 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| || | || || ||||| |||| ||| ||||| | || || |||||| Sbjct 57029 ATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTA 57088 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || |||||||||||||| || ||||| Sbjct 57089 CCAGTTAAAGTCTTAACGAAGATTTGCAT 57117 >seq221 Length=38424 Score = 161 bits (178), Expect = 2e-34 Identities = 163/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||| |||||| || |||||||||||| ||||| ||| | || | ||||| || Sbjct 37672 ACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCATCTTCC 37731 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 | |||||| || |||||||| || | |||||| ||| |||||||| ||||| ||||| Sbjct 37732 AATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGA 37791 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||| | ||| || |||| || ||||| || | ||||||||| | ||| || |||||| Sbjct 37792 ATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATGGTCTTA 37851 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || || || ||||||||||| || |||||||| Sbjct 37852 CCAGTTAAGGTCTTAACGAAAATTTGCATTTT 37883 >seq2246 Length=55178 Score = 100 bits (110), Expect = 6e-16 Identities = 147/204 (72%), Gaps = 8/204 (4%) Strand=Plus/Plus Query 316990 TCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACCCTTCCAACTGACC 317048 ||||| |||||||| ||||||| | | | | ||| || ||||| ||||| | ||||| Sbjct 45866 TCATGTTCAACATAAACAGTTTT-ACATTCTTCTTGAGTTGGGAAACCTTCAACTTGACC 45924 Query 317049 GTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATA 317108 ||| |||| || ||||||| || || || ||||||||||| || || || | |||||| Sbjct 45925 GTTAGCAATAGCTCTCATCAAAGTAGATTTACCAGCACCATTTGGACCACATAAACCATA 45984 Query 317109 ---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATA 317165 | |||| |||| | | || |||| ||||||| | |||||| ||||||| Sbjct 45985 TCTTCTGTTTC---TCTTTAATCTGAATTGGGTCTTGTTCAACAAGATCTTAGCACCATA 46041 Query 317166 TGCCAGAGAGAACTCACAATCACA 317189 || | |||||| ||||| | ||| Sbjct 46042 AGCTAAAGAGAATTCACAGTTACA 46065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046707280996520