Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03]
2,380 sequences; 14,809,507 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq481 168 1e-36
seq1836 165 2e-35
seq221 161 2e-34
seq2246 100 6e-16
>seq481
Length=384
Score = 168 bits (186), Expect = 1e-36
Identities = 159/203 (78%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956
||||| ||| ||| ||||||||||||||||||| | || | || || |||| ||
Sbjct 6 TGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCTAACTGC 65
Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016
|| |||||||| ||||| | |||||||||| |||||||| |||||||||||||| ||
Sbjct 66 TTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTG 125
Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076
| || ||| | || |||||||| |||| ||| ||||| | || || |||||||| ||
Sbjct 126 GACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTT 185
Query 283077 AAAGTCTTAACGAATATCTGCAT 283099
|||||||||||||| || |||||
Sbjct 186 AAAGTCTTAACGAAGATTTGCAT 208
Score = 122 bits (134), Expect = 2e-22
Identities = 121/157 (77%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| ||| ||||||||||||||||||| | || | || || |||
Sbjct 228 ACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCT 287
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| || || |||||||| ||||| | |||||||||| |||||||| ||||||||||||
Sbjct 288 AACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 347
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTT 283047
|| || | || ||| | || |||||||| |||| ||
Sbjct 348 ATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATT 384
>seq1836
Length=79629
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| ||| ||| ||||||||||||||||||| | || | || || |||
Sbjct 57137 ACCAAGTGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCGTCTTCT 57196
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| || || |||||||| ||||| | ||||||||| |||||||| ||||||||||||
Sbjct 57197 AACTGCTTACCGGCAAAAATCAATCTTTGTTGGTCTGGTGGAATACCTTCCTTGTCTTGG 57256
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
|| || | || ||| | || |||||||| |||| ||| ||||| | || || ||||||
Sbjct 57257 ATTTTGGACTTGACGTTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTA 57316
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || |||||||||||||| || |||||
Sbjct 57317 CCAGTTAAAGTCTTAACGAAGATTTGCAT 57345
Score = 152 bits (168), Expect = 1e-31
Identities = 159/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| ||||| || ||| |||||||| ||||| |||| | || | || || |||
Sbjct 56909 ACCAAGTGTAAAGTAGATTCCTTTTGGATATTGTAATCAGATAAAGTTCTACCGTCTTCT 56968
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| ||| || || ||||| || || | |||||||||| |||||||| ||||||||||||
Sbjct 56969 AATTGCTTACCAGCAAAAATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 57028
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || | || || ||||| |||| ||| ||||| | || || ||||||
Sbjct 57029 ATCTTAGATTTAACATTGTCAATGGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTA 57088
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || |||||||||||||| || |||||
Sbjct 57089 CCAGTTAAAGTCTTAACGAAGATTTGCAT 57117
>seq221
Length=38424
Score = 161 bits (178), Expect = 2e-34
Identities = 163/212 (77%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950
|||| |||||| || |||||||||||| ||||| ||| | || | ||||| ||
Sbjct 37672 ACCAAATGTAAAGTAGATTCTTTTTGGATATTGTAATCACTTAAGGTTCTACCATCTTCC 37731
Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010
| |||||| || |||||||| || | |||||| ||| |||||||| ||||| |||||
Sbjct 37732 AATTGTTTACCAGCAAAGATTAATCTTTGTTGATCAGGTGGAATACCTTCCTTATCTTGA 37791
Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070
||||| | ||| || |||| || ||||| || | ||||||||| | ||| || ||||||
Sbjct 37792 ATCTTGGATTTGACATTATCAATGGTGTCGGAGGATTCGACTTCCAAAGTAATGGTCTTA 37851
Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| || || ||||||||||| || ||||||||
Sbjct 37852 CCAGTTAAGGTCTTAACGAAAATTTGCATTTT 37883
>seq2246
Length=55178
Score = 100 bits (110), Expect = 6e-16
Identities = 147/204 (72%), Gaps = 8/204 (4%)
Strand=Plus/Plus
Query 316990 TCATGCTCAACATATGCAGTTTTCAGAATATCCTTC-GTCGGGAACCCTTCCAACTGACC 317048
||||| |||||||| ||||||| | | | | ||| || ||||| ||||| | |||||
Sbjct 45866 TCATGTTCAACATAAACAGTTTT-ACATTCTTCTTGAGTTGGGAAACCTTCAACTTGACC 45924
Query 317049 GTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAGACCATA 317108
||| |||| || ||||||| || || || ||||||||||| || || || | ||||||
Sbjct 45925 GTTAGCAATAGCTCTCATCAAAGTAGATTTACCAGCACCATTTGGACCACATAAACCATA 45984
Query 317109 ---CCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACCATA 317165
| |||| |||| | | || |||| ||||||| | |||||| |||||||
Sbjct 45985 TCTTCTGTTTC---TCTTTAATCTGAATTGGGTCTTGTTCAACAAGATCTTAGCACCATA 46041
Query 317166 TGCCAGAGAGAACTCACAATCACA 317189
|| | |||||| ||||| | |||
Sbjct 46042 AGCTAAAGAGAATTCACAGTTACA 46065
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046707280996520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |