Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq333 325 4e-84 >seq333 Length=169781 Score = 325 bits (360), Expect = 4e-84 Identities = 614/899 (68%), Gaps = 13/899 (1%) Strand=Plus/Plus Query 23205 CATAACACCCATTTTTTGATATTCCCCAACACGTCTTTCGAAAAAATTTGTCTTACCCTC 23264 ||||||||| | ||||||| || ||| | |||| || ||||| ||||| || | Sbjct 13651 CATAACACCAGCTCTTTGATAATCGGAAACTCTCTTTTCAAAGAAATTAGTCTTCCCAGC 13710 Query 23265 TAATGATATATTTTCCATAAAATCAAATGGATTAGAAGTATTATATACAGCTTTACATGA 23324 ||| || ||||| ||||| |||||||||||||||| ||||||||| ||| || | Sbjct 13711 TAAGGAAATATTCTCCATGAAATCAAATGGATTAGTTACATTATATAC--CTTCTTATTA 13768 Query 23325 T--AATTCCTTTAAAAGCCTATCTGCTACAAATTCAATATATTGACACATCAAATCATAG 23382 || | || | ||||| |||||||| |||| |||||||||||| || | || Sbjct 13769 CCAAAAGCAACCAATAATCTATCAGCTACAAACTCAACATATTGACACATTAATCCCGAG 13828 Query 23383 TTTATACCTATTAGTTTTACTGGAATCGCATCATATAAGAATAGTTTTTCAATGGAAACA 23442 || ||||||| | | ||||| | |||||| || || |||||||| | |||| Sbjct 13829 TTCATACCTAACAAACTAACTGGTAAAGCATCAGTGAAATATTCCTTTTCAATAGCAACA 13888 Query 23443 GCATCTT---TAATTATTTGAACAATAACTTCTTCACTAGGTGGATATTTTAAATACTTA 23499 || || ||||| |||| || || |||| | |||| || ||||||| | Sbjct 13889 GCTTCAACAATAATTCTTTGCACGAT---TTCTGGATCAGGTCTATTCTTTAAATGGGCA 13945 Query 23500 AACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAA 23559 || || | ||| ||||||||| ||||| |||||||| || ||| ||||||||||| Sbjct 13946 AATAACATACAAGCAAAATCAGTATGTAATCCTTCATCTCTTGAAATTAATTCATTAGAG 14005 Query 23560 AATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCG 23619 || |||||||||||||||||||||| ||| || | ||| || || | |||||| ||||| Sbjct 14006 AAAGTTAATCCTGGCATTAATCCTCTTTTCTTTAACCAGAAAATCGAAGCAAAGGATCCA 14065 Query 23620 GAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTA 23679 |||||||||||| |||| ||| |||||||| || | | | | || || |||| Sbjct 14066 CTAAAGAAAATACCTTCAATAGCAGCAAAGGCAACTAATCTTTCAGCATATAAGGCATCC 14125 Query 23680 TAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCA 23739 | ||| | |||||||| | ||| || |||||| | ||| ||| || | | Sbjct 14126 TTATCGGCGATCCATTTCAAAGCCCAGTTGGCCTTCTTGGCAATACATGGAATAGTATGA 14185 Query 23740 ATTGCTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAA 23799 ||||| | || | ||| ||||| | ||| | | ||| ||||| || | | | Sbjct 14186 ATTGCATCAAATAAAAATTCAGCTTCTTGAGGATCCTTAACATAAGTATCTATCAAAAGA 14245 Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859 ||| | |||||||||||| ||||||| || || || ||||| || | ||||| Sbjct 14246 GAATAAACTTCAGAATGAATCATTTCAATCATGATTTGGAAACCATAGAATGCTTTAGCT 14305 Query 23860 TCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCA 23919 |||| | |||||| ||| | | || ||| |||||||||| ||||| ||||||||| Sbjct 14306 TCAGGAACTTGAACTTCAGCACAGAAATTTTCCACTAAATTTTCATTAACTATACCATCA 14365 Query 23920 CTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC---ATCAGTTGATAAT 23976 |||||||||||| || | || || |||| | ||| |||| | || Sbjct 14366 GAAGCAGCAAAGAAGGCTAATACTCGGGAAATGAAATAACGTTCATTATCATTCAATCTA 14425 Query 23977 TTTTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCC 24036 || |||||||| | | ||| || |||||| | ||| ||| | ||||| || || Sbjct 14426 TTGTTCCAATCGTGTAAATCCTTACTTAAATCGATTTCTTCAGCGGTCCAGAATGAAGCT 14485 Query 24037 AAGGCACGCTTATACATTAGCCAAATATCATTATGTTGTATTGGAAATATTACGAATCT 24095 || ||||||||| |||| || |||| || | ||||| ||||| || ||||| Sbjct 14486 TCAGCTTTTTTATACATTTGCCATATTTCATGATATCTAATTGGGAATATAACAAATCT 14544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521472485732000