Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20girioi_20[genbank_20GCA_5F001657455.1_202016-06-03] 2,380 sequences; 14,809,507 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq1221 167 3e-36 seq2047 96.9 5e-15 >seq1221 Length=135038 Score = 167 bits (184), Expect = 3e-36 Identities = 314/463 (68%), Gaps = 34/463 (7%) Strand=Plus/Plus Query 50473 AAGGAGATTTAGGACCTGTTTACGGTTTTCAATGGAGACATTTTGGAGCGCGTTACATAA 50532 |||| ||||||||||| ||||| || || |||||||||||||| ||||| || || Sbjct 40637 AAGGTGATTTAGGACCAGTTTATGGATTCCAATGGAGACATTTCGGAGCCGAATATCTAG 40696 Query 50533 ATTGCGAC-GTAAAT-TACGAAGGTCAAGGCGTGGATCAACTGCAAAAAATTATAACGAC 50590 |||| || || | | ||| ||||| || | ||||| || | | |||| | | Sbjct 40697 ATTGTGATAGTGACTATACT--GGTCAGGGGTTTGATCAGCTTGCAGATGTTATTAAAAA 40754 Query 50591 GTTGAAAACAAACCCCGACGATCGGCGTATTTTAATGACCGCCTGGAATCCAACCGATAT 50650 || || ||||| || | ||||| | ||| | ||| | || ||||||||| | ||| | Sbjct 40755 ATTAAAGACAAATCCATATGATCGTAGAATTATTATGTCTGCATGGAATCCACCTGATTT 40814 Query 50651 AGATCAAACCGTTTTACCTCCGTGTCATGTTTTATGTCAATTTTATGC------------ 50698 | ||| | |||||| || ||||||||||| ||||||||||||| Sbjct 40815 TAAAAAAATGGCTTTACCACCTTGTCATGTTTTCTGTCAATTTTATGTAAATTTCCCAGA 40874 Query 50699 ---CACAGACAAT------GTT---------TTATCCTGTCAATGTTATCAAAGATCAGC 50740 || |||| || ||| |||||||| || || || || ||| Sbjct 40875 AAACAAAGACGATACTTCAGTTAGACCAAAATTATCCTGCTTATTATACCAGAGGTCATG 40934 Query 50741 TGATATGGGTTTAGGCGTTCCTTTCAACGTAGCTTCTTACGCTTTATTAACGTATTTGAT 50800 ||||||||| || || || || |||||| | ||||| || ||||||||||| | |||| Sbjct 40935 TGATATGGGCTTGGGGGTACCATTCAACATTGCTTCATATGCTTTATTAACTAAGATGAT 40994 Query 50801 CGCTCAAGCCGTCGATATGAAACCGGGAGAATTTATTCATACGTTAGGAGACGCTCATAT 50860 ||||| || |||||| | ||||||||||||||||| || || || |||||| | Sbjct 40995 TGCTCATATAGTAGATATGGATTGTGGAGAATTTATTCATACTTTGGGTGATGCTCATGT 41054 Query 50861 TTACCTCGATCACGTCGATGCTTTAAAGGAGCAATTGACTCGA 50903 ||| | ||||| | || |||||| | || ||||| ||| || Sbjct 41055 TTATTTGGATCATATTGAAGCTTTACAAGAACAATTTACTAGA 41097 >seq2047 Length=190326 Score = 96.9 bits (106), Expect = 5e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 155889 CCCTTTTCATCGGGTAATCCAATTTCTATCTTCAATTCCAACCGCCCAGGTCTTAATAAT 155948 |||||||| || || | | ||||||| || | | ||| || | || |||||||| ||| Sbjct 114461 CCCTTTTCGTCAGGAAGTGCAATTTCAATTTGAATTTCAAATCTACCTGGTCTTAACAAT 114520 Query 155949 GCTTCGTCAATTAAGTCGGGTCTGTTGGTCATACCTATGATTAAAATGTTGTTTAAAGAT 156008 || |||||||| || ||| || |||||||| |||| || || || ||||| Sbjct 114521 GCCGTATCAATTAAATCTAATCTATTAGTCATACCAATGACCAAGATATTATTTAACTGA 114580 Query 156009 TCTACACCGTCTATTTTAGACAATAATTGATTGACTAC 156046 || ||||| || ||||| |||||||||||||| || || Sbjct 114581 TCCACACCATCCATTTTCGACAATAATTGATTAACAAC 114618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667055354512800