Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq2332 154 2e-32 >seq2332 Length=8947 Score = 154 bits (170), Expect = 2e-32 Identities = 577/906 (64%), Gaps = 29/906 (3%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 |||| ||||| ||| | ||||| |||||||||||||| || ||| || ||||| | Sbjct 1315 TTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTTT 1256 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793 |||| |||||||| ||||| | | | | | ||| | || | | | | | || Sbjct 1255 CCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACCAAATGCAACTAATA 1196 Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853 ||||||| || |||||||| | |||||| ||||| |||| | |||||| |||| | || Sbjct 1195 ATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAATAAAC 1136 Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913 || || | || || || ||| || | || ||| |||| ||||| |||||| Sbjct 1135 TAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAACAATAATCT 1076 Query 16914 TAGCAACTCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972 | | || ||| | | | ||| ||| || | ||| ||| | | ||| || ||| Sbjct 1075 TTTCGACAATTTC-TGGATCTGGTCTATTATTTAAATGAGCAAATAATAAACAAGCAAAA 1017 Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT- 17031 || |||||| || || ||||| | || | ||| || ||||| || || || ||||| Sbjct 1016 TCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAACCTGGCATN 957 Query 17032 -----------------------CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAAC 17068 | |||| |||||||||||| || || | || || Sbjct 956 NNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATAGATGCAAAT 897 Query 17069 GACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTC 17128 || ||| |||||| ||||| || |||| ||||| || | ||||| ||| || || Sbjct 896 GATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCAGCATATAAG 837 Query 17129 GCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATC 17188 | || | | | ||||||| | |||| || |||||| | || || || Sbjct 836 ACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCTAATACATGGAATA 777 Query 17189 GTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATG 17248 ||| || || |||||||| | || ||||| | | || | ||||| ||||| || Sbjct 776 TGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAATATAAGTATCAATT 717 Query 17249 AGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCAT 17308 | ||| || |||| || || || || || || || || || || ||||| || Sbjct 716 AAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCATAAAATGAT 657 Query 17309 CGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATG 17368 ||||| | ||||||||||| | | || ||| || |||||| || || || Sbjct 656 TTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATTAACAATA 597 Query 17369 CCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC-CGGTGT 17427 || || || || || || || |||| | |||||| ||| |||| || | | Sbjct 596 CCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCATCATCATTT 537 Query 17428 AA--GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAA 17485 || | | | ||| || | ||||||||| || ||| | |||||| | |||||||| Sbjct 536 AATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCAGTCCAAAAT 477 Query 17486 CTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545 || |||| || || || | | |||||| |||| ||| || || || | |||| Sbjct 476 GATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAACA 417 Query 17546 TATCTA 17551 ||||| Sbjct 416 AATCTA 411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517529232620400