Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 154 2e-32
>seq2332
Length=8947
Score = 154 bits (170), Expect = 2e-32
Identities = 577/906 (64%), Gaps = 29/906 (3%)
Strand=Plus/Minus
Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733
|||| ||||| ||| | ||||| |||||||||||||| || ||| || ||||| |
Sbjct 1315 TTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTTT 1256
Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTA 16793
|||| |||||||| ||||| | | | | | ||| | || | | | | | ||
Sbjct 1255 CCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTTATTACCAAATGCAACTAATA 1196
Query 16794 ATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGAC 16853
||||||| || |||||||| | |||||| ||||| |||| | |||||| |||| | ||
Sbjct 1195 ATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAATAAAC 1136
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATAC 16913
|| || | || || || ||| || | || ||| |||| ||||| ||||||
Sbjct 1135 TAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAACAATAATCT 1076
Query 16914 TAGCAACTCGTTCCTCGGAC-GGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAA 16972
| | || ||| | | | ||| ||| || | ||| ||| | | ||| || |||
Sbjct 1075 TTTCGACAATTTC-TGGATCTGGTCTATTATTTAAATGAGCAAATAATAAACAAGCAAAA 1017
Query 16973 TCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCAT- 17031
|| |||||| || || ||||| | || | ||| || ||||| || || || |||||
Sbjct 1016 TCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAACCTGGCATN 957
Query 17032 -----------------------CTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAAC 17068
| |||| |||||||||||| || || | || ||
Sbjct 956 NNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATAGATGCAAAT 897
Query 17069 GACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTC 17128
|| ||| |||||| ||||| || |||| ||||| || | ||||| ||| || ||
Sbjct 896 GATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCAGCATATAAG 837
Query 17129 GCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATC 17188
| || | | | ||||||| | |||| || |||||| | || || ||
Sbjct 836 ACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCTAATACATGGAATA 777
Query 17189 GTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATG 17248
||| || || |||||||| | || ||||| | | || | ||||| ||||| ||
Sbjct 776 TGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAATATAAGTATCAATT 717
Query 17249 AGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCAT 17308
| ||| || |||| || || || || || || || || || || ||||| ||
Sbjct 716 AAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCATAAAATGAT 657
Query 17309 CGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATG 17368
||||| | ||||||||||| | | || ||| || |||||| || || ||
Sbjct 656 TTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCATTAACAATA 597
Query 17369 CCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTC-CGGTGT 17427
|| || || || || || || |||| | |||||| ||| |||| || | |
Sbjct 596 CCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCATCATCATTT 537
Query 17428 AA--GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAA 17485
|| | | | ||| || | ||||||||| || ||| | |||||| | ||||||||
Sbjct 536 AATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCAGTCCAAAAT 477
Query 17486 CTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545
|| |||| || || || | | |||||| |||| ||| || || || | ||||
Sbjct 476 GATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAAACATAACA 417
Query 17546 TATCTA 17551
|||||
Sbjct 416 AATCTA 411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517529232620400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |