Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 197 1e-45
>seq2332
Length=8947
Score = 197 bits (218), Expect = 1e-45
Identities = 618/954 (65%), Gaps = 52/954 (5%)
Strand=Plus/Minus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| |||||| ||| | ||||| || ||||||||||| || |||| || |||||||
Sbjct 1315 TTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTTT 1256
Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCC----GTA 16027
||||||||||||| ||||| |||| || |||| | | | | || | |
Sbjct 1255 CCATAAAATCAAATGGATTT-----TGAACATTA--TAGACTTTCTTATTACCAAATGCA 1203
Query 16028 ACTAAT---CTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCT 16084
|||||| ||||| || |||||||| | |||||||||||| || | | || || |||
Sbjct 1202 ACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCT 1143
Query 16085 ATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTA 16144
| | | || || | || | || ||| ||| | ||| || |||| ||||| |
Sbjct 1142 AATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAACA 1083
Query 16145 ATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTAGACAC 16204
|| || | | | | | | ||| ||| |||| || ||| | || |||
Sbjct 1082 ATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAATGAGCAAATAATAAACAA 1023
Query 16205 GCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCT 16264
|| || || ||||| ||||| ||||| | || | ||| || ||||||||||| |||
Sbjct 1022 GCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAACCT 963
Query 16265 GGCATTTTT------------------------CCTCGTTTCTTTAACCAGAATATCGCA 16300
||||| |||| ||||||||||||||| || |
Sbjct 962 GGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATAGAT 903
Query 16301 GCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCG 16360
|||||||| || |||||| ||||| ||||| | ||||| || | ||||| ||| ||
Sbjct 902 GCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCAGCA 843
Query 16361 TACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAA 16420
|| | || ||| | ||||||| | | |||| || |||||| | | |||||
Sbjct 842 TATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGCTTTTCTTCTAATACAT 783
Query 16421 TCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTA 16480
|| ||| || || ||||| || | || ||||| ||| | ||||| |||
Sbjct 782 GGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAATATAAGTA 723
Query 16481 TCAATCAGTAAACTG--TACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCAT 16538
||||| | ||| | || ||||||| || || || || || || || || ||||
Sbjct 722 TCAATTA--AAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAACCAT 665
Query 16539 AGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCAT 16598
| || || ||| || | ||||| ||||| | |||| ||| | || ||||
Sbjct 664 AAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTTTCAT 605
Query 16599 TCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGT 16658
| || ||||| ||| ||||||||| || || |||| | |||||| ||| |||| |
Sbjct 604 TAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTTTCAT 545
Query 16659 CA-GATGTAA-GAATAT-GCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCG 16715
|| || ||| || | |||||| | ||||||||| || ||| | |||||| | |
Sbjct 544 CATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCAGCAG 485
Query 16716 TCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAA 16775
||||||| || |||| || || || | || |||||| |||| ||| || ||||
Sbjct 484 TCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATTGGAA 425
Query 16776 ATACGACGTATCTATCTAAGGA--TTCCTTTAACACGGGTTCATC---TTCCAT 16824
| | || ||||| |||| |||||| || | |||||||| ||||||
Sbjct 424 ACATAACAAATCTA--CGAGGATTTTCCTTCAAGAGTGGTTCATCCTTTTCCAT 373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511398226519600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |