Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq2179 93.3 3e-14
>seq2179
Length=11267
Score = 93.3 bits (102), Expect = 3e-14
Identities = 279/430 (65%), Gaps = 3/430 (1%)
Strand=Plus/Minus
Query 101867 ACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926
||||| ||||| | ||||||||||| || || | |||| || | || || |
Sbjct 6919 ACATAGAATTGGCAGAATACATGACATGGTGGAAGAGCCATCTTTGCAAAATCAGGCGGG 6860
Query 101927 TTCCAAGCACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAAC 101986
||||||||| |||| | || |||||||| ||||||||| || | | | ||||
Sbjct 6859 TTCCAAGCAGACATAATAATTCTTCTATCGTAAGGGTTTGTCTTCAATTTTTTTATCACG 6800
Query 101987 TGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCT 102046
| | ||||| ||| ||||| || ||||||| || | | ||||| || ||
Sbjct 6799 TCGTGCAATTGATCATATCCTTGACCGGTATAATCAGTATCACAATCCTTATACTCAGCC 6740
Query 102047 CCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAA 102106
|| ||||| ||||| || |||||||| || || || | ||| ||||| | |||
Sbjct 6739 CCAAAATGTCTCCATTGGAATCCATAAACTGGACCTAAATCACCTTCTCGACGATCAGTT 6680
Query 102107 AAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCCAGCT 102166
|| || | || || ||| || | ||| ||||| | |||||||| | || || |
Sbjct 6679 AATCCCAAATTGTCCAAATATTCACGAGAACCATTACCCTCCCAAATCTTGACACCTTTT 6620
Query 102167 GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACA 102226
| || | |||| ||||| || || | |||||| | || || | || | |
Sbjct 6619 TCACTTAACAATTTGGCATCAGTCGAACCAGCAACAAACCATAGGAGCTCATGAATGATA 6560
Query 102227 CCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAAACTAAAC 102283
|| | | || |||||||| || ||||| || ||||| ||||| ||| ||||
Sbjct 6559 CCCTTTGAGAAAACTCTCTTTGTTGTTAAGAGCGGAAAAGTGTCATTGGACAAATCAAAC 6500
Query 102284 CTAGACTGTG 102293
|| ||||||
Sbjct 6499 CTTAACTGTG 6490
Score = 87.8 bits (96), Expect = 1e-12
Identities = 132/183 (72%), Gaps = 5/183 (3%)
Strand=Plus/Minus
Query 101676 TTTTAAGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACT 101735
||| ||| |||||||| ||||||| || | || || || |||| |||||| || || |
Sbjct 7166 TTTCAAG-GCATCAATATGATCTAAGTAAACATGCGCGTCACCTAAAGTATGAATGAATT 7108
Query 101736 CTCCAGGCACTAGAT-TAGT-GACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGC 101793
||||| || | || | | || || |||||||| || || | | ||| |||
Sbjct 7107 CTCCA--CAGTCCATGTCGACGATGTGGGCAATCATCTTGGTCAACAATGCATAAGAAGC 7050
Query 101794 AATGTTAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAG 101853
|||||| ||||| || || |||||||| ||| ||||||||||||| | |||||| ||
Sbjct 7049 AATGTTGAATGGAACACCCAACCCCATGTCACAAGATCTTTGATACAATAAACAGGATAG 6990
Query 101854 CTT 101856
|||
Sbjct 6989 CTT 6987
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361240061045030
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |