Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq918 477 1e-129 seq2332 333 3e-86 >seq918 Length=18345 Score = 477 bits (528), Expect = 1e-129 Identities = 1490/2277 (65%), Gaps = 60/2277 (3%) Strand=Plus/Plus Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862 |||| || |||||||| | ||| || || | || || | || ||||||||| || || | Sbjct 8845 CAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAGTACATCCCGGTCT 8904 Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922 | | || |||| ||||| ||||||||||| || | ||| | |||||| Sbjct 8905 TCAATCCCTTTTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTTGGATCTT 8964 Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982 ||||||||||| | ||||||| |||||| || || || | || || || ||||| | Sbjct 8965 TAATATGGATATTTAAAGATTGAGATTGATCAATAAATGCCGCTCTATCAGCTGCCATAT 9024 Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 53042 ||||| ||||| | ||||||||| | || ||||| | ||||| || ||| Sbjct 9025 CAATGATATGTTTTTGAGAAATTTCCCATACTGTCTTATACAAGGCTTTAATCTCAGCTG 9084 Query 53043 GAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCAT 53099 | | ||| | || |||||||| ||| || | ||||| ||| | || | | | Sbjct 9085 GGATGTTAGGTAAGGATTGAATAGAACCATTATTTGAAATAATACTACTTTTAACTGCTT 9144 Query 53100 CATTCCATAATTTTCTC-TCGGTTAAAACTCT-AAGGAGATGCGGATTAACTACTTGAAA 53157 ||||||| ||| | || ||| |||| || ||| |||||||| | ||| || Sbjct 9145 CATTCCA-AATACCCAAATCAACCAAATCTCTTAATAAGAAT-GGATTAACAATTTGGAA 9202 Query 53158 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 53217 ||| |||| | ||||| | | ||||| || ||||| ||||| | | | ||||| Sbjct 9203 TTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATTCATT 9262 Query 53218 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 53277 ||| || || ||||| | ||||| ||||| |||||||| || || || | | |||||| Sbjct 9263 ATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAATTTCT 9322 Query 53278 AAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGG 53334 | || ||||| || || || | |||| |||| ||||||| ||| | || | || Sbjct 9323 TAATCC--ATGTTTTGCCATGTTTTGCTTTA-AGGTATCCCAATCCCATAATTCAGTTGG 9379 Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394 | ||||| | ||| | | || || ||| ||| | Sbjct 9380 TTTTCTATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGATAAGA 9439 Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454 || || || ||||| | | |||| |||| | | || | ||| | | |||||| Sbjct 9440 TTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCATGATAAAT 9499 Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT-TTA 53513 ||||| ||||| | |||||| ||| ||||| | ||||||||| |||| ||| Sbjct 9500 AGTTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCTTA 9558 Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573 | || || || || || || ||||| || || | | || ||||||| | || | | Sbjct 9559 ATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTATTTTTCATGT 9618 Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633 | || ||| |||||||||| |||||||| ||| ||| |||| |||||| | || | Sbjct 9619 TGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTATTTAAATTAC 9678 Query 53634 ---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-------AATTGTC-- 53681 | ||||| ||| | || | | ||| ||||| | ||| || Sbjct 9679 GAGTAACAATC---TTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCAT 9735 Query 53682 CATCTATTACAA-ACATGTTC--AATGCAATAGATGCCAGATTACAAACGGCTACCTCAT 53738 ||||| || ||| | ||| | || ||||| || || | |||||||| || || || | Sbjct 9736 CATCTTTTTCAACAAATGATGGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCTT 9795 Query 53739 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 53798 || | ||||| | || ||| || | ||| | || || | ||||||| Sbjct 9796 CAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAATACCTAAAT 9855 Query 53799 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTT 53858 | | |||||| |||||| |||||| ||||| ||||| | || ||||| |||||||||| Sbjct 9856 TCTTTTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTT 9915 Query 53859 CAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATC 53918 || | |||| ||| | || | | ||| | | ||||| || | ||||| | Sbjct 9916 CAGTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAAT----GGTTTGTCTA 9971 Query 53919 TCTT----TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974 | ||| | ||| ||| | ||| ||| ||||||| || || || |||||| Sbjct 9972 CCACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATCACCATAAACATCA 10031 Query 53975 TCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 54034 || |||||| ||||| || | | || | ||| || || | | | ||||| Sbjct 10032 GGTAACCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACTCTC 10091 Query 54035 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCG 54094 |||||||| | |||||||||||| | ||| |||| |||||||| |||| ||| || Sbjct 10092 TTCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCT 10151 Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154 || ||| ||| ||| ||| ||| | || | | |||||| |||||||| ||||| || Sbjct 10152 TTACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAA 10211 Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214 || | || | |||| || | || || || || ||||| | || | ||||||||| Sbjct 10212 TAAAGGGCAAATGCTCCTGGTCTCTTATTACCACCTTGATCAACATAACGGGCGGTGTTA 10271 Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274 || |||| | | ||| || |||||||| ||||| | ||| ||||| |||| ||||| Sbjct 10272 TTGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCGTTGGTACCGGCAATATAT 10331 Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334 ||| | | |||||||||| ||| || ||| || || || || | || || || Sbjct 10332 GCCCCAGTAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATC 10391 Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394 || || || ||| || ||||||||||| || || || |||||| |||| || | Sbjct 10392 AAAGCACAAGTTTTCAAAGTATCATAGATCCCATCAATTGAATCATCTTTCATAGCAACT 10451 Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454 | ||||| ||||||||| ||| ||| || ||||||||||| || || ||| | Sbjct 10452 AAGAAACATGAAGACATTTGTGGACTTGGAGTACCGGCATTAAATAAAGTTGGTGAACCA 10511 Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT-GAGTCTATATCCCA 54513 || || || | |||| || | | ||| || | || ||| || ||| |||| || Sbjct 10512 TGAGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAG-GGATAT--CA 10568 Query 54514 TT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571 || |||||| || | || || | ||| | | || || ||||||||| | | || Sbjct 10569 TTACCATGAATACCAATGGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTA 10628 Query 54572 TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 54629 || | | | | || || ||| |||||||||| || || || ||||| || || || Sbjct 10629 CCATTAACTCTTAATAAATAAGATCTTTCCAAAGTCTTGAACCCGAAATAATTATAGTTG 10688 Query 54630 AAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 54689 ||| || || || |||| ||| |||| || | || ||| || || || | || Sbjct 10689 AAA--TCACGATCATAAACAATTGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT 10746 Query 54690 CCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTA 54748 ||| | ||| ||||| || ||||||||||| | | || || || ||||| | | Sbjct 10747 -CATAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCA 10805 Query 54749 AATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 54808 |||| || || | |||| | | || |||| | |||| ||| |||| ||| |||||| Sbjct 10806 TATAATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTGGATACG 10865 Query 54809 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTAT 54867 || |||||||| |||| |||||||||||| ||||| || || || || ||| || | Sbjct 10866 GCAATTCTAGCAGCTAAAATGGCATAATCTGGATGAATAGTGGT-CATGTAGGCAGCAGT 10924 Query 54868 TTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAAC 54927 ||| || | | | || ||||| || || || || |||| ||| | |||| || | Sbjct 10925 TTCAGCGGCTAAGTTATCTAATTCGACGGTGGTAACACCATGATAAACTCCT--GAAATG 10982 Query 54928 CTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 54985 ||| | || || | | ||| | ||||| | | ||| || ||||||||| || Sbjct 10983 GTTCTTTGAGTGATGGCGACGGCATCAACATGATTCGGATCTAATCCGTAACATAATCTT 11042 Query 54986 CTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTA 55042 || | || ||||||||||| || ||||| |||||| |||| || |||| Sbjct 11043 TGAACTCTAGCGGTGATTTTATCGAAACGGACATGTTCCTTACGGCCATCTCTTTTA 11099 >seq2332 Length=8947 Score = 333 bits (368), Expect = 3e-86 Identities = 653/958 (68%), Gaps = 44/958 (5%) Strand=Plus/Minus Query 23825 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 23884 || || |||||| || ||||| || ||| || | ||||| ||||| |||||||| Sbjct 1335 TTTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTT 1276 Query 23885 ACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTT 23944 ||| ||||||| ||||||||||| ||||| ||||||| ||||||||||| | | || Sbjct 1275 ACCAGCTAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTT 1216 Query 23945 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTC 24004 | || ||| || | |||||||| || ||||| || | |||| ||||| || Sbjct 1215 ATTACCAAATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTT 1156 Query 24005 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 24064 || ||||| |||| | ||||||| | || |||| | | |||| | ||||||| Sbjct 1155 ACTGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATC 1096 Query 24065 GACCGCGTCTGTTATAATAGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAAT 24120 || || || | |||| ||||| || ||||| | ||| || ||||| Sbjct 1095 AACTGCTTCA---ACAATA-ATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAAT 1040 Query 24121 GTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGT 24180 | ||| | ||||| || ||||| |||| ||| || ||||||| ||||||||| | Sbjct 1039 GAGCAAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCAT 980 Query 24181 TGGAAAACGTGAGTCCGGGCATTAG-----------------GC--CA---CGCTTTT-- 24216 | ||||| || | || ||||| || || | ||||| Sbjct 979 TTGAAAAAGTTAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCT 920 Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276 | | ||| || || || |||||||||||| ||||||||| ||||| || || ||||||| Sbjct 919 TTAACCAGAAAATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGG 860 Query 24277 CAATAAGTCTTTCTCCATA----ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCG 24332 ||| | |||||| |||| ||| | | ||| ||||| || |||||||| Sbjct 859 CAACTAATCTTTCAGCATATAAGACCTCAG-TATCAGTAATCCATCTTAATGCCCAATCA 801 Query 24333 GCCTTCTTTTTTACACAAGGCAT-TGTCTCTATAGCATTAAAGAGATAGtttttttCATT 24391 || || || | | ||| || || ||| || ||||||||||| | || | ||| || Sbjct 800 GCTTTTCTTCTAATACATGGAATATGT-TCAATAGCATTAAATAAGTAATCAGCTTCCTT 742 Query 24392 ACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 24451 ||| |||| ||| |||||||| ||||| ||| |||| |||||||| |||||||| Sbjct 741 TGGATCCTTAATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAAT 682 Query 24452 GGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCG 24511 ||||| || || || || || |||| || | ||| || |||||| |||| Sbjct 681 CATAATTTGGAAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATT 622 Query 24512 TTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTT 24571 ||| |||||||||||| || || || ||| || ||||| || || ||||| | Sbjct 621 TTCAATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGA 562 Query 24572 TATAAAATATTTTTCGTCTGGTGTTAGTTTAT---TCCAATCATTGATATCTTTAGATAT 24628 || || ||| |||| || ||| ||||| ||||||||| | ||||||| || Sbjct 561 AATGAAGTATCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAA 502 Query 24629 ATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTC 24688 ||| | |||||| | |||||||||||||| ||||| || || || | | ||| || || Sbjct 501 ATCAATTTCTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTC 442 Query 24689 ATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT-TTGCAAGGATTGGTTC 24745 ||||||| ||||||||| |||||||||||| ||||||| | ||| || |||||| Sbjct 441 ATGATATCTAATTGGAAACATAACAAATCTACGAGGATTTTCCTTCAA-GAGTGGTTC 385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593702823554400