Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq918 477 1e-129
seq2332 333 3e-86
>seq918
Length=18345
Score = 477 bits (528), Expect = 1e-129
Identities = 1490/2277 (65%), Gaps = 60/2277 (3%)
Strand=Plus/Plus
Query 52804 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 52862
|||| || |||||||| | ||| || || | || || | || ||||||||| || || |
Sbjct 8845 CAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAGTACATCCCGGTCT 8904
Query 52863 TTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTG 52922
| | || |||| ||||| ||||||||||| || | ||| | ||||||
Sbjct 8905 TCAATCCCTTTTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTTGGATCTT 8964
Query 52923 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 52982
||||||||||| | ||||||| |||||| || || || | || || || ||||| |
Sbjct 8965 TAATATGGATATTTAAAGATTGAGATTGATCAATAAATGCCGCTCTATCAGCTGCCATAT 9024
Query 52983 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 53042
||||| ||||| | ||||||||| | || ||||| | ||||| || |||
Sbjct 9025 CAATGATATGTTTTTGAGAAATTTCCCATACTGTCTTATACAAGGCTTTAATCTCAGCTG 9084
Query 53043 GAAGGTTTG-TATTC--TGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCAT 53099
| | ||| | || |||||||| ||| || | ||||| ||| | || | | |
Sbjct 9085 GGATGTTAGGTAAGGATTGAATAGAACCATTATTTGAAATAATACTACTTTTAACTGCTT 9144
Query 53100 CATTCCATAATTTTCTC-TCGGTTAAAACTCT-AAGGAGATGCGGATTAACTACTTGAAA 53157
||||||| ||| | || ||| |||| || ||| |||||||| | ||| ||
Sbjct 9145 CATTCCA-AATACCCAAATCAACCAAATCTCTTAATAAGAAT-GGATTAACAATTTGGAA 9202
Query 53158 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 53217
||| |||| | ||||| | | ||||| || ||||| ||||| | | | |||||
Sbjct 9203 TTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATTCATT 9262
Query 53218 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 53277
||| || || ||||| | ||||| ||||| |||||||| || || || | | ||||||
Sbjct 9263 ATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAATTTCT 9322
Query 53278 AAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGG 53334
| || ||||| || || || | |||| |||| ||||||| ||| | || | ||
Sbjct 9323 TAATCC--ATGTTTTGCCATGTTTTGCTTTA-AGGTATCCCAATCCCATAATTCAGTTGG 9379
Query 53335 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 53394
| ||||| | ||| | | || || ||| ||| |
Sbjct 9380 TTTTCTATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGATAAGA 9439
Query 53395 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 53454
|| || || ||||| | | |||| |||| | | || | ||| | | ||||||
Sbjct 9440 TTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCATGATAAAT 9499
Query 53455 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT-TTA 53513
||||| ||||| | |||||| ||| ||||| | ||||||||| |||| |||
Sbjct 9500 AGTTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCTTA 9558
Query 53514 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 53573
| || || || || || || ||||| || || | | || ||||||| | || | |
Sbjct 9559 ATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTATTTTTCATGT 9618
Query 53574 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTC 53633
| || ||| |||||||||| |||||||| ||| ||| |||| |||||| | || |
Sbjct 9619 TGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTATTTAAATTAC 9678
Query 53634 ---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCA-------AATTGTC-- 53681
| ||||| ||| | || | | ||| ||||| | ||| ||
Sbjct 9679 GAGTAACAATC---TTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCAT 9735
Query 53682 CATCTATTACAA-ACATGTTC--AATGCAATAGATGCCAGATTACAAACGGCTACCTCAT 53738
||||| || ||| | ||| | || ||||| || || | |||||||| || || || |
Sbjct 9736 CATCTTTTTCAACAAATGATGGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCTT 9795
Query 53739 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 53798
|| | ||||| | || ||| || | ||| | || || | |||||||
Sbjct 9796 CAGGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAATACCTAAAT 9855
Query 53799 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTT 53858
| | |||||| |||||| |||||| ||||| ||||| | || ||||| ||||||||||
Sbjct 9856 TCTTTTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTT 9915
Query 53859 CAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATC 53918
|| | |||| ||| | || | | ||| | | ||||| || | ||||| |
Sbjct 9916 CAGTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAAT----GGTTTGTCTA 9971
Query 53919 TCTT----TTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTG 53974
| ||| | ||| ||| | ||| ||| ||||||| || || || ||||||
Sbjct 9972 CCACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATCACCATAAACATCA 10031
Query 53975 TCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGT 54034
|| |||||| ||||| || | | || | ||| || || | | | |||||
Sbjct 10032 GGTAACCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACTCTC 10091
Query 54035 TTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCG 54094
|||||||| | |||||||||||| | ||| |||| |||||||| |||| ||| ||
Sbjct 10092 TTCATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCT 10151
Query 54095 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 54154
|| ||| ||| ||| ||| ||| | || | | |||||| |||||||| ||||| ||
Sbjct 10152 TTACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAA 10211
Query 54155 TATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTA 54214
|| | || | |||| || | || || || || ||||| | || | |||||||||
Sbjct 10212 TAAAGGGCAAATGCTCCTGGTCTCTTATTACCACCTTGATCAACATAACGGGCGGTGTTA 10271
Query 54215 TTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAG 54274
|| |||| | | ||| || |||||||| ||||| | ||| ||||| |||| |||||
Sbjct 10272 TTGAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCGTTGGTACCGGCAATATAT 10331
Query 54275 CTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATT 54334
||| | | |||||||||| ||| || ||| || || || || | || || ||
Sbjct 10332 GCCCCAGTAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATC 10391
Query 54335 AATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGT 54394
|| || || ||| || ||||||||||| || || || |||||| |||| || |
Sbjct 10392 AAAGCACAAGTTTTCAAAGTATCATAGATCCCATCAATTGAATCATCTTTCATAGCAACT 10451
Query 54395 AGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCG 54454
| ||||| ||||||||| ||| ||| || ||||||||||| || || ||| |
Sbjct 10452 AAGAAACATGAAGACATTTGTGGACTTGGAGTACCGGCATTAAATAAAGTTGGTGAACCA 10511
Query 54455 TGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT-GAGTCTATATCCCA 54513
|| || || | |||| || | | ||| || | || ||| || ||| |||| ||
Sbjct 10512 TGAGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAG-GGATAT--CA 10568
Query 54514 TT--GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTG 54571
|| |||||| || | || || | ||| | | || || ||||||||| | | ||
Sbjct 10569 TTACCATGAATACCAATGGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTA 10628
Query 54572 TTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TG 54629
|| | | | | || || ||| |||||||||| || || || ||||| || || ||
Sbjct 10629 CCATTAACTCTTAATAAATAAGATCTTTCCAAAGTCTTGAACCCGAAATAATTATAGTTG 10688
Query 54630 AAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTACAT 54689
||| || || || |||| ||| |||| || | || ||| || || || | ||
Sbjct 10689 AAA--TCACGATCATAAACAATTGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT 10746
Query 54690 CCATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTA 54748
||| | ||| ||||| || ||||||||||| | | || || || ||||| | |
Sbjct 10747 -CATAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCA 10805
Query 54749 AATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACG 54808
|||| || || | |||| | | || |||| | |||| ||| |||| ||| ||||||
Sbjct 10806 TATAATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTGGATACG 10865
Query 54809 GCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTAT 54867
|| |||||||| |||| |||||||||||| ||||| || || || || ||| || |
Sbjct 10866 GCAATTCTAGCAGCTAAAATGGCATAATCTGGATGAATAGTGGT-CATGTAGGCAGCAGT 10924
Query 54868 TTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAAC 54927
||| || | | | || ||||| || || || || |||| ||| | |||| || |
Sbjct 10925 TTCAGCGGCTAAGTTATCTAATTCGACGGTGGTAACACCATGATAAACTCCT--GAAATG 10982
Query 54928 CTTCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTT 54985
||| | || || | | ||| | ||||| | | ||| || ||||||||| ||
Sbjct 10983 GTTCTTTGAGTGATGGCGACGGCATCAACATGATTCGGATCTAATCCGTAACATAATCTT 11042
Query 54986 CTAATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTA 55042
|| | || ||||||||||| || ||||| |||||| |||| || ||||
Sbjct 11043 TGAACTCTAGCGGTGATTTTATCGAAACGGACATGTTCCTTACGGCCATCTCTTTTA 11099
>seq2332
Length=8947
Score = 333 bits (368), Expect = 3e-86
Identities = 653/958 (68%), Gaps = 44/958 (5%)
Strand=Plus/Minus
Query 23825 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 23884
|| || |||||| || ||||| || ||| || | ||||| ||||| ||||||||
Sbjct 1335 TTTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTT 1276
Query 23885 ACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTT 23944
||| ||||||| ||||||||||| ||||| ||||||| ||||||||||| | | ||
Sbjct 1275 ACCAGCTAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTT 1216
Query 23945 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTC 24004
| || ||| || | |||||||| || ||||| || | |||| ||||| ||
Sbjct 1215 ATTACCAAATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTT 1156
Query 24005 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 24064
|| ||||| |||| | ||||||| | || |||| | | |||| | |||||||
Sbjct 1155 ACTGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATC 1096
Query 24065 GACCGCGTCTGTTATAATAGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAAT 24120
|| || || | |||| ||||| || ||||| | ||| || |||||
Sbjct 1095 AACTGCTTCA---ACAATA-ATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAAT 1040
Query 24121 GTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGT 24180
| ||| | ||||| || ||||| |||| ||| || ||||||| ||||||||| |
Sbjct 1039 GAGCAAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCAT 980
Query 24181 TGGAAAACGTGAGTCCGGGCATTAG-----------------GC--CA---CGCTTTT-- 24216
| ||||| || | || ||||| || || | |||||
Sbjct 979 TTGAAAAAGTTAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCT 920
Query 24217 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 24276
| | ||| || || || |||||||||||| ||||||||| ||||| || || |||||||
Sbjct 919 TTAACCAGAAAATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGG 860
Query 24277 CAATAAGTCTTTCTCCATA----ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCG 24332
||| | |||||| |||| ||| | | ||| ||||| || ||||||||
Sbjct 859 CAACTAATCTTTCAGCATATAAGACCTCAG-TATCAGTAATCCATCTTAATGCCCAATCA 801
Query 24333 GCCTTCTTTTTTACACAAGGCAT-TGTCTCTATAGCATTAAAGAGATAGtttttttCATT 24391
|| || || | | ||| || || ||| || ||||||||||| | || | ||| ||
Sbjct 800 GCTTTTCTTCTAATACATGGAATATGT-TCAATAGCATTAAATAAGTAATCAGCTTCCTT 742
Query 24392 ACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAAT 24451
||| |||| ||| |||||||| ||||| ||| |||| |||||||| ||||||||
Sbjct 741 TGGATCCTTAATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAAT 682
Query 24452 GGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCG 24511
||||| || || || || || |||| || | ||| || |||||| ||||
Sbjct 681 CATAATTTGGAAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATT 622
Query 24512 TTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTT 24571
||| |||||||||||| || || || ||| || ||||| || || ||||| |
Sbjct 621 TTCAATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGA 562
Query 24572 TATAAAATATTTTTCGTCTGGTGTTAGTTTAT---TCCAATCATTGATATCTTTAGATAT 24628
|| || ||| |||| || ||| ||||| ||||||||| | ||||||| ||
Sbjct 561 AATGAAGTATCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAA 502
Query 24629 ATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTC 24688
||| | |||||| | |||||||||||||| ||||| || || || | | ||| || ||
Sbjct 501 ATCAATTTCTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTC 442
Query 24689 ATGATATTGAATTGGAAAAATAACAAATCTATTTGGATTTT-TTGCAAGGATTGGTTC 24745
||||||| ||||||||| |||||||||||| ||||||| | ||| || ||||||
Sbjct 441 ATGATATCTAATTGGAAACATAACAAATCTACGAGGATTTTCCTTCAA-GAGTGGTTC 385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593702823554400
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