Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq2193 113 4e-20 seq2023 102 7e-17 >seq2193 Length=52601 Score = 113 bits (124), Expect = 4e-20 Identities = 164/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 25030 TAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAAC 25089 ||| ||||||||| ||| |||| || || || || || ||||||||| ||| ||| Sbjct 24593 TAACAATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAAT 24652 Query 25090 CCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAG 25149 | | || || | | | || ||||| ||||| ||||| |||||| | || || Sbjct 24653 CTTCTGACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAG 24712 Query 25150 ATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATT 25209 |||||||| | | || ||||| || || ||||||||||| | |||| | |||| | Sbjct 24713 ATCAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGACT 24772 Query 25210 ACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 |||| |||||||||||||| ||| | || | || ||| |||| |||| || Sbjct 24773 ACAACATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGG 24824 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 |||||||| ||| |||| || || || || || ||||||||| ||| ||| | | Sbjct 25054 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 25113 Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154 || || | | | || ||||| ||||| || || |||||| | || ||||||| Sbjct 25114 GACACTATTGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCTCCAGATCAA 25173 Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAAT 25214 ||| | | || || || || || ||||||||||| | |||| | |||||||||| Sbjct 25174 CAACGTTTGATTTTCGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGATTACAAC 25233 Query 25215 ATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 || ||||||||||||||| | || | || || ||||| |||| || Sbjct 25234 ATCCAAAAGGAATCTACTTTACATTTAGTCTTGAGATTAAGAGGTGG 25280 >seq2023 Length=11923 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 25031 AAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACC 25090 |||||||||||| ||| |||| || || || || || || |||||| ||| ||| | Sbjct 3910 AAAAATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACTATTACCTTAGAAGTTGAATC 3969 Query 25091 CGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGA 25150 | || || | | | || |||| || || || || |||||| | || || Sbjct 3970 TTCTGACACTATTGACAATGTCAAATCCAAGATCCAAGACAAGGAAGGTATTCCACCTGA 4029 Query 25151 TCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTA 25210 ||||||||| | |||||||| || || ||||| |||||| | |||| | | || || Sbjct 4030 CCAACAAAGATTAATCTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTTTATCTGACTA 4089 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||| || |||||||||||||| | ||| | || ||| ||||| |||| || Sbjct 4090 CAACATCCAAAAGGAATCTACCTTACACTTAGTCTTAAGATTAAGAGGTGG 4140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410784133337420