Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq2179 109 4e-19 >seq2179 Length=11267 Score = 109 bits (120), Expect = 4e-19 Identities = 266/401 (66%), Gaps = 4/401 (1%) Strand=Plus/Minus Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACA 97290 ||||| || || | ||||||||||| || || | ||||| |||| || ||| || | Sbjct 6919 ACATAGAATTGGCAGAATACATGACATGGTGGAAGAGCCATCTTTGCAAAATC--AGGCG 6862 Query 97291 --TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA 97348 ||||||||| |||| | |||||||||||| |||||||| | | | || || | Sbjct 6861 GGTTCCAAGCAGACATAATAATTCTTCTATCGTAAGGGTTTGTCTTCAATTTTTTTATCA 6802 Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTG 97408 | | ||||||||| |||| || ||||| | | | | | ||| || | Sbjct 6801 CGTCGTGCAATTGATCATATCCTTGACCGGTATAATCAGTATCACAATCCTTATACTCAG 6742 Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468 | |||||||| |||||||||||||||||||| || || | || |||||| | |||| Sbjct 6741 CCCCAAAATGTCTCCATTGGAATCCATAAACTGGACCTAAATCACCTTCTCGACGATCAG 6682 Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAG 97528 || || | || || ||||| | ||| ||||| | |||||||| | ||||| Sbjct 6681 TTAATCCCAAATTGTCCAAATATTCACGAGAACCATTACCCTCCCAAATCTTGACACCTT 6622 Query 97529 ATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAA 97588 | | | | |||| ||||| || || | |||||| | | || | | | Sbjct 6621 TTTCACTTAACAATTTGGCATCAGTCGAACCAGCAACAAACCATAGGAGCTCATGAATGA 6562 Query 97589 CACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629 ||| | | || |||||||| ||||||||||| |||||| Sbjct 6561 TACCCTTTGAGAAAACTCTCTTTGTTGTTAAGAGCGGAAAA 6521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346773307132100