Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq2179 109 4e-19
>seq2179
Length=11267
Score = 109 bits (120), Expect = 4e-19
Identities = 266/401 (66%), Gaps = 4/401 (1%)
Strand=Plus/Minus
Query 97231 ACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACA 97290
||||| || || | ||||||||||| || || | ||||| |||| || ||| || |
Sbjct 6919 ACATAGAATTGGCAGAATACATGACATGGTGGAAGAGCCATCTTTGCAAAATC--AGGCG 6862
Query 97291 --TTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTA 97348
||||||||| |||| | |||||||||||| |||||||| | | | || || |
Sbjct 6861 GGTTCCAAGCAGACATAATAATTCTTCTATCGTAAGGGTTTGTCTTCAATTTTTTTATCA 6802
Query 97349 TCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGACCTTGATATTCTG 97408
| | ||||||||| |||| || ||||| | | | | | ||| || |
Sbjct 6801 CGTCGTGCAATTGATCATATCCTTGACCGGTATAATCAGTATCACAATCCTTATACTCAG 6742
Query 97409 CTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCAC 97468
| |||||||| |||||||||||||||||||| || || | || |||||| | ||||
Sbjct 6741 CCCCAAAATGTCTCCATTGGAATCCATAAACTGGACCTAAATCACCTTCTCGACGATCAG 6682
Query 97469 AGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTGCACACCAG 97528
|| || | || || ||||| | ||| ||||| | |||||||| | |||||
Sbjct 6681 TTAATCCCAAATTGTCCAAATATTCACGAGAACCATTACCCTCCCAAATCTTGACACCTT 6622
Query 97529 ATGCTGCAAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAATTCTTCCACAA 97588
| | | | |||| ||||| || || | |||||| | | || | | |
Sbjct 6621 TTTCACTTAACAATTTGGCATCAGTCGAACCAGCAACAAACCATAGGAGCTCATGAATGA 6562
Query 97589 CACCTCTCCAAAATACTCTCTTAGTTGTTAAGAGAGGAAAA 97629
||| | | || |||||||| ||||||||||| ||||||
Sbjct 6561 TACCCTTTGAGAAAACTCTCTTTGTTGTTAAGAGCGGAAAA 6521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346773307132100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |