Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 141 1e-28
seq2179 129 9e-25
>seq2193
Length=52601
Score = 141 bits (156), Expect = 1e-28
Identities = 176/241 (73%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 124536 ACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCA 124595
||||||||||| || | ||||| |||| || || || || || |||| ||||| |
Sbjct 24595 ACAATGCAAATCTTCGTCAAGACTTTAACTGGTAAGACCATTACCTTAGAAGTTGAATCT 24654
Query 124596 AATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGAT 124655
||| || ||| ||| | || ||||| |||||||| |||||||| || || |||
Sbjct 24655 TCTGACACTATTGACAATGTCAAGTCTAAAATCCAAGATAAGGAAGGTATTCCTCCAGAT 24714
Query 124656 CAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTAT 124715
|||||| | | |||||||| || || ||||| || || || |||| ||| || ||
Sbjct 24715 CAACAACGTTTGATTTTTGCTGGTAAGCAATTGGAAGACGGTAGAACTTTATCCGACTAC 24774
Query 124716 AATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAAT 124775
|| |||||||| ||||| ||||| ||||| |||||| | || |||||||||| ||| |
Sbjct 24775 AACATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGGTATGCAAATT 24834
Query 124776 T 124776
|
Sbjct 24835 T 24835
Score = 141 bits (156), Expect = 1e-28
Identities = 174/238 (73%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| || | ||||| |||| || || || || ||| |||| ||||| | |
Sbjct 24826 ATGCAAATTTTCGTCAAGACCTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 24885
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
|| ||||| ||| | ||| ||||||||||| || |||||||| || || ||||||
Sbjct 24886 GACACAATCGATAACGTTAAATCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 24945
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | ||||| || || || |||||||| || || |||| || || || ||
Sbjct 24946 CAACGTTTGATTTTCGCTGGTAAGCAATTAGAAGACGGTAGAACTTTGTCTGACTACAAC 25005
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAATT 124776
|||||||| ||||| ||||| ||||| |||||| | || |||||||||| ||| ||
Sbjct 25006 ATTCAAAAGGAATCCACTTTACATTTAGTTTTAAGATTGAGAGGTGGTATGCAAATTT 25063
>seq2179
Length=11267
Score = 129 bits (142), Expect = 9e-25
Identities = 240/347 (69%), Gaps = 4/347 (1%)
Strand=Plus/Minus
Query 205559 TTACATGAAATTGTACAAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTATA 205617
|||||| ||||| || || | |||||| ||||| | | |||| ||| ||| |||
Sbjct 6921 TTACATAGAATTGG-CAGAATACATGACATGGTGGAAGAGCCATCTTTGCAAAATCAGGC 6863
Query 205618 GGATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatA 205677
|| ||||| || | | || || ||||| | ||| || | || | ||| |||||
Sbjct 6862 GGGTTCCAAGCAGACATAATAATTCTTCTATCGTAAGGGTTTGTCTTCAATTTTTTTATC 6803
Query 205678 ATAT-GTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTT 205736
| | ||| ||||||||| |||||||| ||||||| ||||| ||| |||| |
Sbjct 6802 ACGTCGTGC-AATTGATCATATCCTTGACCGGTATAATCAGTATCACAATCCTTATACTC 6744
Query 205737 AGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCTATC 205796
||| |||||||| | |||||| || ||||||||||||||||||||||||||| | |||
Sbjct 6743 AGCCCCAAAATGTCTCCATTGGAATCCATAAACTGGACCTAAATCACCTTCTCGACGATC 6684
Query 205797 ATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggattcc 205856
| | || || || | | ||||| || ||||| | |||||||| | || ||
Sbjct 6683 AGTTAATCCCAAATTGTCCAAATATTCACGAGAACCATTACCCTCCCAAATCTTGACACC 6624
Query 205857 tttattttttaGAATATTTGTATTAGTTGATCCAGATATAAACCATA 205903
||| | ||| | || | || ||| || |||| | ||||||||
Sbjct 6623 TTTTTCACTTAACAATTTGGCATCAGTCGAACCAGCAACAAACCATA 6577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755432108704000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |