Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 125 1e-23
>seq2193
Length=52601
Score = 125 bits (138), Expect = 1e-23
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| | |||||| || ||||||||||| ||||| ||| || || || || || ||
Sbjct 24824 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGA-ATGTTGTAGTCGGA 24766
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| |||||| | || || ||||| || |||||||||||||| | ||| ||||| |||||
Sbjct 24765 TAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 24706
Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229
||| ||||| |||||||| ||| || ||| ||| ||
Sbjct 24705 AATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 24646
Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278
||||| || || || ||||| ||||| || || | ||| |||||||||
Sbjct 24645 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATT 24597
Score = 120 bits (132), Expect = 5e-22
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATT-CTTTAGATATATTATAATCTGA 146109
|||||||| | |||||| || ||||||||||| |||| |||| || || || || || ||
Sbjct 25052 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGA-ATGTTGTAGTCAGA 24994
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| |||||| | || |||||||| || ||||| |||||||| | ||| ||||| |||||
Sbjct 24993 CAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGG 24934
Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229
||| ||||| || ||||| || || ||| ||| ||
Sbjct 24933 AATACCTTCCTTGTCTTGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAAC 24874
Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
||||| ||||| || ||||| ||||| || || | ||| ||||||||
Sbjct 24873 TTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826
Score = 116 bits (128), Expect = 6e-21
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || ||||||||||||||||| || || || ||||| ||
Sbjct 25280 CCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCGGAT 25221
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | || || ||||| || ||||| |||||||| | ||| ||||| ||||||
Sbjct 25220 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 25161
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||| || ||| ||| |||
Sbjct 25160 ATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 25101
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
|||| || || || ||||| ||||| || || | ||| ||||||||
Sbjct 25100 TCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743502885977600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |