Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_002642.1
Length=144575
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 322 4e-83
>seq2332
Length=8947
Score = 322 bits (356), Expect = 4e-83
Identities = 623/912 (68%), Gaps = 51/912 (6%)
Strand=Plus/Minus
Query 15944 TTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTCTAATGAAATATTT 16003
|||||||| ||| ||||||||||||||| || || ||||| || ||||||||||||||
Sbjct 1316 TTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTACCAGCTAATGAAATATTT 1257
Query 16004 TCCATAAAATCAAAAGGATTTTTTGAACA--ATAGTATTTATCGCATCCCAATTCCAAC- 16060
|||||||||||||| ||| ||||||||| |||| ||| | | |||| | ||||
Sbjct 1256 TCCATAAAATCAAATGGA--TTTTGAACATTATAGACTTTCT-TATTACCAAATGCAACT 1200
Query 16061 AATAATCTATCCGCCACAAATTCTATATACTGTTTCATTAAATCACAGTTCATTCCTATT 16120
||||||||||| || |||||||| | ||| || ||| || | || |||||| |||| |
Sbjct 1199 AATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTTACTGTTCATACCTAAT 1140
Query 16121 AATTTAACAGGGATTGCTTCTGTTAAAAAAtttttttCTATATTAACCGCTTCAATGATT 16180
|| |||| || | ||| || || ||| | | ||||| |||| ||| ||||||| ||
Sbjct 1139 AAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATCAACTGCTTCAACAATA 1080
Query 16181 ATATCTCTTACTACACTATTTAACGGA--GGGTTTA----ATAAGTGTTTAAACATTATA 16234
|| | || | ||| |||| ||| ||| || ||| || ||| | || |
Sbjct 1079 ATCT---TTTCGACA--ATTT-CTGGATCTGGTCTATTATTTAAATGAGCAAATAATAAA 1026
Query 16235 CAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGA 16294
|||||||||||| ||| || ||||| || |||| ||||| || |||||||| || | |
Sbjct 1025 CAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGAAAAAGTTAAA 966
Query 16295 CCTGGCATT------------------------AGTCCTCGTTTTTTAATCCAAAATATA 16330
|||||||| | |||| ||| || | ||| || |||
Sbjct 965 CCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAACCAGAAAATA 906
Query 16331 GCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCA 16390
| |||||||| ||| |||||| ||||||||||| || ||||| ||||| |||| |||
Sbjct 905 GATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAACTAATCTTTCA 846
Query 16391 CC--GTACGTTCT-AtttttactttctatccattttttagcccaatttgctttttgtttA 16447
| || | || | | | | | |||||| || ||||||| |||||| | ||
Sbjct 845 GCATATAAGACCTCAGTATCAGT---AATCCATCTTAATGCCCAATCAGCTTTTCTTCTA 789
Query 16448 ACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttttCTTTGCTATCTAAAATA 16507
| ||| || | || || ||||||||||| |||| ||| || ||| ||||
Sbjct 788 ATACATGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGATCCTTAATA 729
Query 16508 TAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGAAAA 16567
|||||||| |||| | ||| |||||||||||||||| || || || || |||
Sbjct 728 TAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATAATTTGGAAA 669
Query 16568 CCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTT 16627
|||||||| || ||||||| | ||||| ||||| | |||| |||| ||| |||
Sbjct 668 CCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCAATTAAATTT 609
Query 16628 TCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATGTGTTTAATAAAAtttttt 16687
|| ||||| || ||||| || ||||| || || | || | ||| || | | ||
Sbjct 608 TCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATGAAGTATCTT 549
Query 16688 tCGTTATC-TGAAAGT--TTTAACCAGTCAGAAAAATCTTTTGATAAATCGACCTCTTCT 16744
|| | ||| | || | | | ||| ||| |||||||| |||||| | |||||
Sbjct 548 TCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCAATTTCTTCA 489
Query 16745 ACAGTCCAAAAAGAAGCAACAGCCTTTTTATACATTTTCCATATGTCTTCGTAAACAATA 16804
|||||||||| || || | || || || || | || ||| || || | || |||
Sbjct 488 GCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGATATCTAATT 429
Query 16805 GGAAACACAACA 16816
||||||| ||||
Sbjct 428 GGAAACATAACA 417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462497373058000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |