Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq2179 116 3e-21 >seq2179 Length=11267 Score = 116 bits (128), Expect = 3e-21 Identities = 209/303 (69%), Gaps = 2/303 (1%) Strand=Plus/Plus Query 20140 GAAAAAGGAGTTAAGATTTGG-AGCGCACATGGATCTAAGCAATTTTTACACAGCAATGG 20198 |||||||| || ||||||||| || | | |||| ||| ||| ||| ||| || Sbjct 6618 GAAAAAGGTGTCAAGATTTGGGAGGGTA-ATGGTTCTCGTGAATATTTGGACAATTTGGG 6676 Query 20199 ATTTGACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTT 20258 ||| | |||| ||| || ||||| ||||| || |||||||| |||||||||||||| Sbjct 6677 ATTAACTGATCGTCGAGAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTT 6736 Query 20259 TGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACA 20318 ||| ||||| ||| || | || ||||| || |||||| |||||||| || Sbjct 6737 TGGGGCTGAGTATAAGGATTGTGATACTGATTATACCGGTCAAGGATATGATCAATTGCA 6796 Query 20319 AAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTG 20378 | || || || | | || || ||||| |||| |||||||||||| | | || || Sbjct 6797 CGACGTGATAAAAAAATTGAAGACAAACCCTTACGATAGAAGAATTATTATGTCTGCTTG 6856 Query 20379 GAACGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTA 20438 |||| | ||| | | |||||| | || ||||||||| | | |||||||| || Sbjct 6857 GAACCCGCCTGATTTTGCAAAGATGGCTCTTCCACCATGTCATGTATTCTGCCAATTCTA 6916 Query 20439 CGT 20441 || Sbjct 6917 TGT 6919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399171691410850