Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq2193 105 5e-18 >seq2193 Length=52601 Score = 105 bits (116), Expect = 5e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167 ||||||||||||||||| || || || | ||| ||||| ||||||||||||||| | Sbjct 24824 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAT 24765 Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | |||| |||| ||| || || || || ||||| || ||||| || |||| Sbjct 24764 AAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAG 24707 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | ||| ||||| || ||||| ||| || | | |||| | || | Sbjct 24706 GAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 24647 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || | |||||| ||||| || || | |||||| || ||||||||||| Sbjct 24646 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCAT 24598 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169 ||||||||||||||||| || || || | ||| ||||| |||||||||||||| | Sbjct 25052 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 24993 Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 |||| | | |||| || | ||| || || ||||| ||||| || ||||| || |||| Sbjct 24992 AAAGTT--CTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAG 24935 Query 45228 GCACACCCTCCTTGTCCGCAATTTT 45252 | | ||| |||||||| |||||| Sbjct 24934 GAATACCTTCCTTGTCTTGAATTTT 24910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395063018103130