Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 105 5e-18
>seq2193
Length=52601
Score = 105 bits (116), Expect = 5e-18
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCG--T 45167
||||||||||||||||| || || || | ||| ||||| ||||||||||||||| |
Sbjct 24824 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAT 24765
Query 45168 TCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | |||| |||| ||| || || || || ||||| || ||||| || ||||
Sbjct 24764 AAAGTT--CTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAG 24707
Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287
| | ||| ||||| || ||||| ||| || | | |||| | || |
Sbjct 24706 GAATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAA 24647
Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || | |||||| ||||| || || | |||||| || |||||||||||
Sbjct 24646 CTTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCAT 24598
Score = 95.1 bits (104), Expect = 1e-14
Identities = 109/145 (75%), Gaps = 4/145 (3%)
Strand=Plus/Minus
Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTC 45169
||||||||||||||||| || || || | ||| ||||| |||||||||||||| |
Sbjct 25052 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGAC 24993
Query 45170 --AGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227
|||| | | |||| || | ||| || || ||||| ||||| || ||||| || ||||
Sbjct 24992 AAAGTT--CTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAG 24935
Query 45228 GCACACCCTCCTTGTCCGCAATTTT 45252
| | ||| |||||||| ||||||
Sbjct 24934 GAATACCTTCCTTGTCTTGAATTTT 24910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395063018103130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |