Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq2332 338 6e-88
>seq2332
Length=8947
Score = 338 bits (374), Expect = 6e-88
Identities = 653/958 (68%), Gaps = 43/958 (4%)
Strand=Plus/Minus
Query 13895 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTA 13954
|||| ||||| || |||||||| ||| |||||| |||||||| ||||||||||||
Sbjct 1334 TTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTTA 1275
Query 13955 CCTTCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACA-TAAACACTTTATC 14013
|| | | ||| ||||||||||||||||||||||||||| | ||| || | ||||| |
Sbjct 1274 CCAGCTAATGAAATATTTTCCATAAAATCAAATGGATTT-TGAACATTATAGACTTTCTT 1216
Query 14014 ACAACCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATC 14073
| ||| | | | | || ||||||||| |||| || |||| ||||||| |||| || |
Sbjct 1215 ATTACCAAATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTT 1156
Query 14074 ACAATTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGA 14133
|| |||||||||| || | || || | | || || ||| |||| ||||| |||
Sbjct 1155 ACTGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATC 1096
Query 14134 CACAGCCTCGTTTATAATAATCGT---AATAATTTCATTAGAAGGAGGATATTTTAGATG 14190
|| || || | ||||||| | | |||||| | || || |||| |||
Sbjct 1095 AACTGCTTC---AACAATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAATG 1039
Query 14191 TTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTT 14250
||| | |||||| ||||||||| ||| | || |||||||||| ||| | ||| ||
Sbjct 1038 AGCAAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATT 979
Query 14251 TGAAAATGTTAATCCTG------------------------GCATCAATCCTCGtttttt 14286
|||||| ||||| |||| ||||||| |||| ||| ||
Sbjct 978 TGAAAAAGTTAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTT 919
Query 14287 tAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGC 14346
|||||| || || | || |||||||| |||||| || || ||||| |||||||| ||
Sbjct 918 TAACCAGAAAATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGC 859
Query 14347 TATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGA 14406
| ||||| ||| || | | | | | | | |||||| || ||||| ||||
Sbjct 858 AACTAATCTTTCAGCATATAAGACCTCAGTATCAGTAATCCATCTTAATGCCCAATCAGC 799
Query 14407 tttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTC--CTTCTCTTTA 14464
|||| || ||||| | || |||||||||||||||||| | || |||| ||||
Sbjct 798 TTTTCTTCTAATACATGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTC-CTTTG 740
Query 14465 G-TACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCAT 14523
| | ||| ||| || |||||||| | | | ||| |||| || || || ||||| ||
Sbjct 739 GATCCTT--AATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAAT 682
Query 14524 AGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCT 14583
|| || ||||||||||| || ||||||| | ||| || |||| |||| |
Sbjct 681 CATAATTTGGAAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATT 622
Query 14584 TTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14643
||| |||||||||||||| ||||||||| || ||||| ||||| ||||
Sbjct 621 TTCAATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGA 562
Query 14644 AATAAAGTATTGCTCTTCATTGCTGAGTTT---TTTCCAATCGGCTAAATCCTTAGAAAG 14700
||| |||||| || |||| | | ||| | ||||||| |||||| ||| |
Sbjct 561 AATGAAGTATCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAA 502
Query 14701 ATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTC 14760
||| | ||| ||| | |||||||| || | ||||| || || | | ||| |||||
Sbjct 501 ATCAATTTCTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTC 442
Query 14761 TTTATATAATATAGGAAAAACTACAAATCT-TGAAGATGTTTCTTTAAGAATTGGTTC 14817
| |||| || ||||| | |||||||| || ||| || ||| ||| | ||||||
Sbjct 441 ATGATATCTAATTGGAAACATAACAAATCTACGAGGATTTTCCTTCAAG-AGTGGTTC 385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482330345820400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |