Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq2193 100 2e-16 seq2023 86.0 5e-12 >seq2193 Length=52601 Score = 100 bits (110), Expect = 2e-16 Identities = 150/212 (71%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179 |||| ||||| ||||| ||||||||||||||||||| | ||| ||| ||||||||| Sbjct 24801 ATGTAAAGTG--GATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTACCGTCTTCCAAT 24744 Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239 || || || ||| | || | | ||||||||| || | ||||||||||| ||| Sbjct 24743 TGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATT 24684 Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299 | |||||| | ||| ||||||| | || ||| | ||| ||| | || || Sbjct 24683 TTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCA 24624 Query 18300 GTCAATGTTTTTACAAAAATTTGCATTTTTaa 18331 || || || || || || ||||||||| |||| Sbjct 24623 GTTAAAGTCTTGACGAAGATTTGCATTGTTAA 24592 >seq2023 Length=11923 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Minus Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || ||||| ||||| ||||||||||| | | ||| ||| |||||| ||||| || || Sbjct 4110 GTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 4051 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GGCAATTTGTTGCT 18246 ||| |||| | ||||||||| || || | |||||||| || || || | | | Sbjct 4050 GCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGAT--T 3993 Query 18247 TGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATG 18306 |||| | ||| ||||||| | || ||| | ||| || | || || || || | Sbjct 3992 TGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAGG 3933 Query 18307 TTTTTACAAAAATTTGCATTTTT 18329 | || || ||||||||||||||| Sbjct 3932 TCTTGACGAAAATTTGCATTTTT 3910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379332303164850