Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 100 2e-16
seq2023 86.0 5e-12
>seq2193
Length=52601
Score = 100 bits (110), Expect = 2e-16
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| ||||| ||||||||||||||||||| | ||| ||| |||||||||
Sbjct 24801 ATGTAAAGTG--GATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTACCGTCTTCCAAT 24744
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239
|| || || ||| | || | | ||||||||| || | ||||||||||| |||
Sbjct 24743 TGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCTTGGATT 24684
Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299
| |||||| | ||| ||||||| | || ||| | ||| ||| | || ||
Sbjct 24683 TTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCA 24624
Query 18300 GTCAATGTTTTTACAAAAATTTGCATTTTTaa 18331
|| || || || || || ||||||||| ||||
Sbjct 24623 GTTAAAGTCTTGACGAAGATTTGCATTGTTAA 24592
>seq2023
Length=11923
Score = 86.0 bits (94), Expect = 5e-12
Identities = 142/203 (70%), Gaps = 4/203 (2%)
Strand=Plus/Minus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||| ||||| ||||||||||| | | ||| ||| |||||| ||||| || ||
Sbjct 4110 GTAGATTCCTTTTGGATGTTGTAGTCAGATAAAGTTCTACCATCTTCTAATTGCTTACCA 4051
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC--GGCAATTTGTTGCT 18246
||| |||| | ||||||||| || || | |||||||| || || || | | |
Sbjct 4050 GCAAAGATTAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATCTTGGAT--T 3993
Query 18247 TGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATG 18306
|||| | ||| ||||||| | || ||| | ||| || | || || || || |
Sbjct 3992 TGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATAGTCTTACCAGTTAAGG 3933
Query 18307 TTTTTACAAAAATTTGCATTTTT 18329
| || || |||||||||||||||
Sbjct 3932 TCTTGACGAAAATTTGCATTTTT 3910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379332303164850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |