Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2332 125 1e-23 seq2179 105 1e-17 >seq2332 Length=8947 Score = 125 bits (138), Expect = 1e-23 Identities = 306/466 (66%), Gaps = 35/466 (8%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| |||||||| || ||||||||||| |||| ||||| ||||||||| Sbjct 856 GTTGCCTTTGCTGCCGTTGAAGGTATTTTCTTTAGTGGATCATTTGCATCTATTTTCTGG 915 Query 101978 ATCAAGAACAGGGGTAT------------------------TTTGCCTGGTCTCACCTCC 102013 | ||||| || ||| | |||| ||| | || | Sbjct 916 TTAAAGAAAAGAGGTTTGATGCNNNNNNNNNNNNNNNNNNNNATGCCAGGTTTAACTTTT 975 Query 102014 TCCAATGAGTTCATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTG 102073 || ||||| || |||| ||| || |||||| | ||| || ||||| || | | || Sbjct 976 TCAAATGAATTAATTTGTAGAGATGAAGGTTTACATACTGATTTTGCTTGTTTATTATTT 1035 Query 102074 AAAAAGGGTTTTGTTGATACCCCATCAAGAGAAAGGATTCTTGAAA---TTGTCACTGAA 102130 | ||| | ||| ||| ||||| || | |||| || | |||| Sbjct 1036 GCTCA---TTTAAATAATAGACCAGATCCAGAAA---TTGTCGAAAAGATTATTGTTGAA 1089 Query 102131 GCCGTCCGAATTGAACAAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATG 102190 || || |||||| | |||| | |||| | | | | || |||| ||| | || ||| Sbjct 1090 GCAGTTGATATTGAAAAGGAATATTTCACTGATGCATTACCAGTTAGTTTATTAGGTATG 1149 Query 102191 AACTGCAAGTTGATGAGCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATG 102250 ||| | || |||||| | || || |||||||||| || |||| | |||| |||| | | Sbjct 1150 AACAGTAAATTGATGTGTCAATATGTTGAATTTGTTGCCGATAGATTATTAGTTGCATTT 1209 Query 102251 GG-ACTAGAAAAGCACTATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCT 102309 || | || |||| |||||||||| || || || || ||||| |||||||| | Sbjct 1210 GGTAATAAGAAAGT-CTATAATGTTCAAAATCCATTTGATTTTATGGAAAATATTTCATT 1268 Query 102310 CGAGAATAAGACCAACTTTTTTGAAAAGAGAGTCGCCGAGTATCAA 102355 | ||| || |||||||||||||||||||| | || |||||| Sbjct 1269 AGCTGGTAAAACTAACTTTTTTGAAAAGAGAGTTTCTGATTATCAA 1314 >seq2179 Length=11267 Score = 105 bits (116), Expect = 1e-17 Identities = 202/290 (70%), Gaps = 6/290 (2%) Strand=Plus/Plus Query 35333 ATCTGGAACGCTAATGGGTCGCGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCA 35392 || ||| | | |||||| || || |||| |||||||| | || ||| ||| | | Sbjct 6633 ATTTGGGAGGGTAATGGTTCTCGTGAATATTTGGACAATTTGGGATTAACTGATCGTCGA 6692 Query 35393 GAGGGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGAT 35452 || || ||||| || || || || |||||||||||| | |||||||| ||||| ||| | Sbjct 6693 GAAGGTGATTTAGGTCCAGTTTATGGATTCCAATGGAGACATTTTGGGGCTGAGTATAAG 6752 Query 35453 ACCTGTTCTTCCGATTATACTGG-AAAGGGTATTGATCAATTGGCCAATATACTAAAGAC 35511 ||| | | |||||||| || |||| || |||||||||| | | | |||| | Sbjct 6753 GATTGTGATACTGATTATACCGGTCAAGGATA-TGATCAATTGCACGACGTGATAAAAAA 6811 Query 35512 CCTGAGAGA-AAATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATC 35570 ||| ||| ||| || | |||||||| || |||||| | || ||||| || ||| Sbjct 6812 ATTGA-AGACAAACCCTTACGATAGAAGAATTATTATGTCTGCTTGGAACCCGCCTGATT 6870 Query 35571 TTCACCTTATGGCTCTTCCTCCATGCCACAT-GACTGCTCAATTTTATGT 35619 || ||||||||||| ||||| || | |||| ||||| ||||| Sbjct 6871 TTGCAAAGATGGCTCTTCCACCATGTCATGTATTCTGC-CAATTCTATGT 6919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989551922016150