Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq918 488 7e-133
seq2332 336 3e-87
>seq918
Length=18345
Score = 488 bits (540), Expect = 7e-133
Identities = 1492/2275 (66%), Gaps = 56/2275 (2%)
Strand=Plus/Plus
Query 64835 CAAT-GTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTT 64893
|||| || |||||||| | ||| || || | || || | || ||||||||| || || |
Sbjct 8845 CAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAGTACATCCCGGTCT 8904
Query 64894 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTG 64953
| | || |||| ||||| ||||||||||| || | ||| | ||||||
Sbjct 8905 TCAATCCCTTTTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTTGGATCTT 8964
Query 64954 CTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTT 65013
||||||||||| | ||||||| |||||| || || || | || || || ||||| |
Sbjct 8965 TAATATGGATATTTAAAGATTGAGATTGATCAATAAATGCCGCTCTATCAGCTGCCATAT 9024
Query 65014 TTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTG 65073
||||| ||||| | ||||||||| | || ||||| | ||||| || |||
Sbjct 9025 CAATGATATGTTTTTGAGAAATTTCCCATACTGTCTTATACAAGGCTTTAATCTCAGCTG 9084
Query 65074 GAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCAT 65130
| | ||| | || ||||| || ||| || || ||||| ||| | || | | |
Sbjct 9085 GGATGTTAGGTAAGGATTGAATAGAACCATTATTTGAAATAATACTACTTTTAACTGCTT 9144
Query 65131 CATTCCATAATTTTCTC-TCGGTTAAAACTCT-AAGGAGATGCGGATTAACTACTTGAAA 65188
||||||| ||| | || ||| |||| || ||| |||||||| | ||| ||
Sbjct 9145 CATTCCA-AATACCCAAATCAACCAAATCTCTTAATAAGAAT-GGATTAACAATTTGGAA 9202
Query 65189 TTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATT 65248
||| |||| | ||||| | | ||||| || ||||| ||||| | | | |||||
Sbjct 9203 TTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATTCATT 9262
Query 65249 ATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCT 65308
||| || || ||||| | ||||| ||||| |||||||| || || || | | ||||||
Sbjct 9263 ATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAATTTCT 9322
Query 65309 AAGACCGTATGTTCTG--ATTTTATCTTTTAGAGGT-TCCCAATTCCAAAGATCCGACGG 65365
| || ||||| || || || | |||| |||| ||||||| ||| | || | ||
Sbjct 9323 TAATCC--ATGTTTTGCCATGTTTTGCTTTA-AGGTATCCCAATCCCATAATTCAGTTGG 9379
Query 65366 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 65425
| ||||| | ||| | | || || ||| ||| |
Sbjct 9380 TTTTCTATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGATAAGA 9439
Query 65426 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 65485
|| || || ||||| | | |||| |||| | | || | ||| | | ||||||
Sbjct 9440 TTCATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCATGATAAAT 9499
Query 65486 GGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAAT-TTA 65544
||||| ||||| | |||||| ||| ||||| | ||||||||| |||| |||
Sbjct 9500 AGTTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCTTA 9558
Query 65545 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 65604
| || || || || || || ||||| || || | | || ||||||| | || | |
Sbjct 9559 ATGCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTATTTTTCATGT 9618
Query 65605 TAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC 65664
| || ||| |||||||||| |||||||| ||| ||| |||| |||||| | ||| |
Sbjct 9619 TGGAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTATTTAAATTAC 9678
Query 65665 ---TGACAAT-----TACTTTGACCACATCCTTCAGTTTGAGAAAATCAA--ATCGCTCA 65714
| ||||| || ||| | || ||| | | | || || ||| |||
Sbjct 9679 GAGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCA-TCA 9737
Query 65715 TCTATTACAA-ACATGTTC--AATGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 65771
||| || ||| | ||| | || |||| || || | |||||||| || || || | |
Sbjct 9738 TCTTTTTCAACAAATGATGGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCTTCA 9797
Query 65772 GCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTT 65831
| | ||||| | || ||| || | ||| | || || | ||||||||
Sbjct 9798 GGTGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAATACCTAAATTC 9857
Query 65832 TGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCA 65891
| |||||| |||||| |||||| ||||| ||||| | || ||||||||||||||||||
Sbjct 9858 TTTTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCA 9917
Query 65892 ATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATCTC 65951
| || | ||| | || | | ||| | | | ||||| || | ||||| | |
Sbjct 9918 GTTTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAAT----GGTTTGTCTACC 9973
Query 65952 TT----TTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 66007
||| | ||| ||| | ||| ||| |||| || || || || ||||||
Sbjct 9974 ACGACCTTCACGTTCATATTTTTCATATAATTGTTCAAATTCATCACCATAAACATCAGG 10033
Query 66008 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 66067
|| |||||| ||||| || | | || | ||| || || | | | ||||| ||
Sbjct 10034 TAACCCAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACTCTCTT 10093
Query 66068 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTCCTCGTT 66127
|||||| | |||||||||||| | ||| ||||||||||||| |||| ||| || ||
Sbjct 10094 CATAAATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCTTT 10153
Query 66128 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTCCAAGTA 66187
||| ||| ||| ||| ||| | || | | |||||| ||||||| ||||| || ||
Sbjct 10154 ACCTTGATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAATA 10213
Query 66188 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 66247
| ||| | |||| || | || || || || ||||| | || | |||||||||||
Sbjct 10214 AAGGGCAAATGCTCCTGGTCTCTTATTACCACCTTGATCAACATAACGGGCGGTGTTATT 10273
Query 66248 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCT 66307
|||| | | ||| || |||||||| ||||| ||||| ||||| |||| |||||
Sbjct 10274 GAAAACACGTACCATGGGGATAATACCGTTGGAAGTACCGTTGGTACCGGCAATATATGC 10333
Query 66308 TCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 66367
||| | | |||||||||| ||| || ||| || || || || | || || || ||
Sbjct 10334 CCCAGTAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATCAA 10393
Query 66368 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 66427
|| || ||| || ||||||||||| || || || |||||| |||| || ||
Sbjct 10394 AGCACAAGTTTTCAAAGTATCATAGATCCCATCAATTGAATCATCTTTCATAGCAACTAA 10453
Query 66428 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 66487
||||| ||||||||| ||| ||| || ||||||||||| || || ||| | ||
Sbjct 10454 GAAACATGAAGACATTTGTGGACTTGGAGTACCGGCATTAAATAAAGTTGGTGAACCATG 10513
Query 66488 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCT-GAGTCTATATCCCATT 66546
|| || | |||| || | | ||| || | |||||| || ||| |||| ||||
Sbjct 10514 AGTGAAAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAG-GGATAT--CATT 10570
Query 66547 --GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTT 66604
|||||| || | || || | ||| | | || || ||||||||| | | ||
Sbjct 10571 ACCATGAATACCAATGGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTACC 10630
Query 66605 GTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAA 66662
|| | | | || || || ||| |||||||||| || || || ||||| || || ||||
Sbjct 10631 ATTAACTCTTAATAAATAAGATCTTTCCAAAGTCTTGAACCCGAAATAATTATAGTTGAA 10690
Query 66663 AAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCC 66722
| || || || |||| ||| | || || | || ||| || || || | || |
Sbjct 10691 A--TCACGATCATAAACAATTGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT-C 10747
Query 66723 ATGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATAGTTGAA 66781
|| | ||| ||||| || ||||||||||| | | || || || ||||| | |
Sbjct 10748 ATAAGTCTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCATA 10807
Query 66782 TAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGC 66841
||| || | | |||| | | || |||| | |||| ||| |||| ||| ||||||||
Sbjct 10808 TAATTCTTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTGGATACGGC 10867
Query 66842 TATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGT-GGCTGCTATTT 66900
|||||||| |||| |||||||||||| ||||| || || || || ||| || |||
Sbjct 10868 AATTCTAGCAGCTAAAATGGCATAATCTGGATGAATAGTGGT-CATGTAGGCAGCAGTTT 10926
Query 66901 CGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCT 66960
| || || | | || ||||| || || || || |||| ||| | |||| || | |
Sbjct 10927 CAGCGGCTAAGTTATCTAATTCGACGGTGGTAACACCATGATAAACTCCT--GAAATGGT 10984
Query 66961 TCAT--AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCT 67018
|| | || || | | ||| | ||||| | | ||| || ||||||||| ||
Sbjct 10985 TCTTTGAGTGATGGCGACGGCATCAACATGATTCGGATCTAATCCGTAACATAATCTTTG 11044
Query 67019 AATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTA 67073
|| | || ||||||||||| || ||||| |||||| |||| || ||||
Sbjct 11045 AACTCTAGCGGTGATTTTATCGAAACGGACATGTTCCTTACGGCCATCTCTTTTA 11099
>seq2332
Length=8947
Score = 336 bits (372), Expect = 3e-87
Identities = 650/954 (68%), Gaps = 36/954 (4%)
Strand=Plus/Minus
Query 35848 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 35907
|| || |||||| || ||||| || ||| || | ||||| ||||| ||||||||
Sbjct 1335 TTTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTT 1276
Query 35908 ACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAttttttt 35967
||| ||||||| ||||||||||| ||||| |||||||| ||||||||| | ||| ||
Sbjct 1275 ACCAGCTAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTT 1216
Query 35968 AAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTC 36027
| || ||| || | |||||||| || |||||||| | |||| ||||| ||
Sbjct 1215 ATTACCAAATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTT 1156
Query 36028 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 36087
|| ||||| |||| | ||||||| | || |||| | | |||| | |||||||
Sbjct 1155 ACTGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATC 1096
Query 36088 GACCGCGTCTGTTATAATAGATATTACTGTTTCTTCACTCGGTGGATACAATAAATGTTT 36147
|| || || ||||| | || ||||| | ||| || ||||||
Sbjct 1095 AACTGCTTCAACAATAATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAATGAGC 1036
Query 36148 AAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGA 36207
||| | ||||| || ||||| |||| ||| || ||||||| ||||||||| || ||
Sbjct 1035 AAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCATTTGA 976
Query 36208 AAACGTGAGTCCGGGCATTAG-----------------GC--CA---CGCTTTT--TAAG 36243
||| || | || ||||| || || | ||||| | |
Sbjct 975 AAAAGTTAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCTTTAA 916
Query 36244 CCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAAT 36303
||| || || || |||||||||||| ||||||||| ||||| || || ||||||||||
Sbjct 915 CCAGAAAATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGGCAAC 856
Query 36304 AAGTCTCTCTCCATA----ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 36359
| ||| || |||| ||| || | ||| ||||| || |||||||| || |
Sbjct 855 TAATCTTTCAGCATATAAGACCT-CAGTATCAGTAATCCATCTTAATGCCCAATCAGCTT 797
Query 36360 TCTTTTTTACACAAGGCAT-TGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTA 36418
| || | | ||| || || ||| || ||||||||||| | || | ||| || |
Sbjct 796 TTCTTCTAATACATGGAATATGT-TCAATAGCATTAAATAAGTAATCAGCTTCCTTTGGA 738
Query 36419 TCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCC 36478
|| |||| ||| |||||||| ||||| ||| |||| |||||||| ||||||||
Sbjct 737 TCCTTAATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATCATA 678
Query 36479 ATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCT 36538
||||| || || || || || |||| || | ||| || ||||||| |||| |||
Sbjct 677 ATTTGGAAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTTTCA 618
Query 36539 GCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATA 36598
|||||||||||| || || || ||| || ||||| || || ||||| | ||
Sbjct 617 ATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAAATG 558
Query 36599 AAATATTTTTCGTTTGGTGTTAGTTTAT---TCCAATCATTGATATCTTTAGATATATCC 36655
|| ||| |||| | ||| ||||| ||||||||| | ||||||| || |||
Sbjct 557 AAGTATCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAATCA 498
Query 36656 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 36715
| |||||| | |||||||||||||| ||||| || || || | | ||| || ||||||
Sbjct 497 ATTTCTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCATGA 438
Query 36716 TATTGAATTGGAAAAATAACAAATCTATTTTGATTTT-TTGCAAGGATTGGTTC 36768
||| ||||||||| |||||||||||| |||||| | ||| || ||||||
Sbjct 437 TATCTAATTGGAAACATAACAAATCTACGAGGATTTTCCTTCAA-GAGTGGTTC 385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658151985285200
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