Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq918 495 5e-135
seq2332 307 1e-78
>seq918
Length=18345
Score = 495 bits (548), Expect = 5e-135
Identities = 1487/2269 (66%), Gaps = 44/2269 (2%)
Strand=Plus/Plus
Query 70797 CAAT-GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTT 70855
|||| ||||| ||||| | || || || |||| || | || ||||||||| || || |
Sbjct 8845 CAATAGTAAATTGAATAGCAGCAGAAGCAGCTTGAGTTCTTAAATAGTACATCCCGGTCT 8904
Query 70856 TTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCG 70914
| | || |||| ||||| ||||||||||| || | ||| || | | |||||
Sbjct 8905 TCAATCCCTTTTTCCAACCGTAGAAATGCATACTGGTCAATTTACCCATTGTT-GGATCT 8963
Query 70915 GCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATT 70974
|| || ||||| | || ||| |||||| || || || | || || || |||||
Sbjct 8964 TTAATATGGATATTTAAAGATTGAGATTGATCAATAAATGCCGCTCTATCAGCTGCCATA 9023
Query 70975 TTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCT 71034
| ||||| ||||| | ||||||||| | || ||||| | ||||| || ||
Sbjct 9024 TCAATGATATGTTTTTGAGAAATTTCCCATACTGTCTTATACAAGGCTTTAATCTCAGCT 9083
Query 71035 GGAAGGTTTG-TATTC--TGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCT 71091
|| | ||| | || ||||| || ||| || || |||||| ||| |||| | ||
Sbjct 9084 GGGATGTTAGGTAAGGATTGAATAGAACCATTATTTGAAATAATACTACTTTTAACTGCT 9143
Query 71092 TCATTCCATAATTTTCTC-TCGGTTAAAACTCT-AAGGAGATGAGGATTAACTACTTGAA 71149
|||||||| ||| | || ||| |||| || ||| |||||||| | ||| |
Sbjct 9144 TCATTCCA-AATACCCAAATCAACCAAATCTCTTAATAAGAAT-GGATTAACAATTTGGA 9201
Query 71150 ATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCAT 71209
|||| |||| | ||||| | | ||||| || ||||| ||||| | | ||||
Sbjct 9202 ATTCACCAGCAAGAACTCTTCTTGAATAAATGTTTGAAGTATATGGTTCGAAACATTCAT 9261
Query 71210 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTC 71269
|||| || || ||||| | ||||| ||||| |||||||| || || || ||| |||||
Sbjct 9262 TATTACCTAAGATTTGTGATGTTGAAGCAGTTGGCATAGGGGCAACTAAAAGAGAATTTC 9321
Query 71270 TAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGGTA 71329
| | |||||| | || || | |||| | ||||||| ||| | || | ||||
Sbjct 9322 TTAATCCATGTTTTGCCATGTTTTGCTTTAAGGTATCCCAATCCCATAATTCAGTTGGTT 9381
Query 71330 CAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTAT 71389
| || | | || ||| |||| ||| | |
Sbjct 9382 TTCTATTCCATAAATCATATTGTAATAAACCCTGAGATGCAGGTGAACCTGGATAAGATT 9441
Query 71390 CGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGG 71449
| || || ||||||| || ||||| |||| | | || | || ||| |||||| |
Sbjct 9442 CATAAGGACCTTCTTCTTGGGCTAATTCAATAGAAGTTTCCACGGCAGCATGATAAATAG 9501
Query 71450 TTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAAT-TTAAG 71508
|||| || || | |||| | ||| ||||| | ||||||||| |||| ||||
Sbjct 9502 TTTCAAAGATTTGAATATTTAATTCTCTGGCTTCTTGAGAATCAAATGG-TAATCTTAAT 9560
Query 71509 AGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTA 71568
|| || || || || || ||||| || || | | || ||||| | | || | ||
Sbjct 9561 GCCATGAATGCATCAGCCAAACCTTGTACCCCCAAGGCAATTGGTCTATTTTTCATGTTG 9620
Query 71569 GAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 71628
||| ||| |||||||||| |||||||| ||| ||| |||| |||||| | ||| | |
Sbjct 9621 GAAGTTTTGGCTTCTGGAACTGGATAATAGTTACGATCAATAACTTTATTTAAATTAC-G 9679
Query 71629 ACTATTACT-TTGACCACATCCTTTAGTTTGAGAAAATCAAATC--------TCC-CATC 71678
| || | | ||| | || | || ||| ||||| | | | || ||||
Sbjct 9680 AGTAACAATCTTGGTAATTTCATGTAATTTATCAAAATTATACCATGAATGATCATCATC 9739
Query 71679 TATTACAA-ACACGTTC--AAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGC 71735
| || ||| | | | | ||||||| || || | |||||||| || || || | ||
Sbjct 9740 TTTTTCAACAAATGATGGTAAGGCAATTGAAGCTAAGTTACAAACAGCAACTTCTTCAGG 9799
Query 71736 ATCGGCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTG 71795
| ||||| | ||||||| || | ||| | || || | |||||||| |
Sbjct 9800 TGATGAATATTCAACAATTTCACAACATAAATTGGATGATTTAATAATACCTAAATTCTT 9859
Query 71796 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAAT 71855
|||||| |||||| |||||| ||||| ||||| | ||||| ||||||||||||||| |
Sbjct 9860 TTGATTGGTCTTTTGGTTACAAGCATCTTTATATAACATAAATGGAGTACCAGTTTCAGT 9919
Query 71856 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAT-TCTTGTATCTCT 71914
|| | ||| | || | | ||| | | | ||||| || | | ||| | |
Sbjct 9920 TTGGGCTTCCAAGATGGAATACCATAATTTTTGTGCCTTAATGGTTTGTCTACCACGACC 9979
Query 71915 TTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATC 71974
|| | | ||| |||| | ||||||| |||| || || || || || ||| ||| |
Sbjct 9980 TT-CACGTTCATATTTTTCATATAATTGTTCAAATTCATCACCATAAACATCAGGTAACC 10038
Query 71975 CAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAA 72034
||||| |||||| || | | |||| ||| || |||| | | |||| |||||||
Sbjct 10039 CAGGAGCTTCATTAGGGGAAAATAATGTCCAATCACCATTTTGTTCCACTCTCTTCATAA 10098
Query 72035 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 72094
| | |||||||||||| | ||| |||| |||||||| |||| || || || |||
Sbjct 10099 ATAAATCAGGAATCCATAATGCTGGGAATAAATCTCTGGCTCTAATTTCTTCTTTACCTT 10158
Query 72095 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 72154
||| ||| ||| ||| | || | | |||||| |||||||| ||||| || || | ||
Sbjct 10159 GATTTTTTCTAATATCAATAAAATCAAAAATATCTGAATGCCATGGTTCTAAATAAAGGG 10218
Query 72155 CCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 72214
| | |||| || | || || || || ||||| | || | ||||||||||| |||
Sbjct 10219 CAAATGCTCCTGGTCTCTTATTACCACCTTGATCAACATAACGGGCGGTGTTATTGAAAA 10278
Query 72215 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 72274
| | | ||| || |||||||| ||||| | ||| ||||| |||| ||||| |||
Sbjct 10279 CACGTACCATGGGGATAATACCGTTGGAAGTACCGTTGGTACCGGCAATATATGCCCCAG 10338
Query 72275 TGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334
| | ||||||||| ||| || ||| || || || || | || || || || || |
Sbjct 10339 TAGAACGAATATTATGAATATGTAAACCAATACCACCAGCACTCTTTGAAATCAAAGCAC 10398
Query 72335 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 72394
| ||| || ||||||||||| || || || |||||| |||| || || ||||
Sbjct 10399 AAGTTTTCAAAGTATCATAGATCCCATCAATTGAATCATCTTTCATAGCAACTAAGAAAC 10458
Query 72395 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 72454
| ||||||||| ||| ||| || ||||||||||| || || ||| | || || |
Sbjct 10459 ATGAAGACATTTGTGGACTTGGAGTACCGGCATTAAATAAAGTTGGTGAACCATGAGTGA 10518
Query 72455 ACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATT--GATG 72512
| | |||| |||| | ||| || | |||||| || |||| |||| |||
Sbjct 10519 AAAACTTTTGTGACATCATATTATAAGATTCAATAACTCGAGGGATAT--CATTACCATG 10576
Query 72513 TATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTAT 72572
|| || | || || | ||| | | ||| || ||||||||| | | || ||| |
Sbjct 10577 AATACCAATGGCCACTCTCATGATTAAATGTTGTGGTCTTTCAGCAACTTTACCATTAAC 10636
Query 72573 TTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCT 72630
| | || || || ||| |||||||||| || || || ||||| || || ||||| ||
Sbjct 10637 TCTTAATAAATAAGATCTTTCCAAAGTCTTGAACCCGAAATAATTATAGTTGAAA--TCA 10694
Query 72631 CGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTG 72690
|| || |||| ||| | ||||| | || ||| || || || |||| |||
Sbjct 10695 CGATCATAAACAATTGCTGAATTTAATTCATCGGCATGTTCACAAATAATAT-CATAAGT 10753
Query 72691 ATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATC 72749
| ||| ||||| || ||||||||||| | | || || |||||||| | |||| ||
Sbjct 10754 CTCCTTGGAAATCATAGGAGAATGTTTATCGGTCTTGGGGTTAACATAATCATATAATTC 10813
Query 72750 CTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCT 72809
| | |||| | | || |||| | |||| || |||| ||| |||||||| |||||
Sbjct 10814 TTTACTAACTTGAGAATATTGTTTGGTAGTTTGTTTATGTAAATTGGATACGGCAATTCT 10873
Query 72810 GGCGGCTAGAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTG 72868
|| |||| |||||||||||||||||| || || || || ||| || |||| || |
Sbjct 10874 AGCAGCTAAAATGGCATAATCTGGATGAATAGTGGT-CATGTAGGCAGCAGTTTCAGCGG 10932
Query 72869 CCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT-- 72926
| | | || ||||| || || || || |||| ||| | |||| || | ||| |
Sbjct 10933 CTAAGTTATCTAATTCGACGGTGGTAACACCATGATAAACTCCT--GAAATGGTTCTTTG 10990
Query 72927 AGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTTTCTAATACG 72986
|| || | | ||| | ||||| | | ||| || ||||||||| || || |
Sbjct 10991 AGTGATGGCGACGGCATCAACATGATTCGGATCTAATCCGTAACATAATCTTTGAACTCT 11050
Query 72987 AGACGTGATTTTATCAAACATAACATTTTCCCGGCATCCATTTCGTTTA 73035
|| ||||||||||| || |||| |||| | |||| || ||||
Sbjct 11051 AGCGGTGATTTTATCGAAACGGACATGTTCCTTACGGCCATCTCTTTTA 11099
>seq2332
Length=8947
Score = 307 bits (340), Expect = 1e-78
Identities = 633/939 (67%), Gaps = 40/939 (4%)
Strand=Plus/Minus
Query 41755 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTT 41814
|| || |||||| || ||||| || ||| || | ||||| ||||| ||||| ||
Sbjct 1335 TTTAGCCATAACACCAGCCTTTTGATAATCAGAAACTCTCTTTTCAAAAAAGTTAGTTTT 1276
Query 41815 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttttt 41874
|| | ||||| ||||||||||| |||||||| ||||| ||||||||| | ||| ||
Sbjct 1275 ACCAGCTAATGAAATATTTTCCATAAAATCAAATGGATTTTGAACATTATAGACTTTCTT 1216
Query 41875 AAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTC 41934
| || ||| || | |||||||| || | ||||| | |||| ||||| ||
Sbjct 1215 ATTACCAAATGCAACTAATAATCTATCGGCAACAAATTCAACATATTGACACATCAATTT 1156
Query 41935 ACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGA 41994
|| ||||| |||| | ||||||| | || |||| | | |||| | |||||||
Sbjct 1155 ACTGTTCATACCTAATAAACTAACTGGTAATGCATCAGTGAAATATTCCTTTTCAATATC 1096
Query 41995 GACCGCGTCTGTTATAATAGATCTT----ACTGTTTCTTCACTCGGTGGATACAATAAAT 42050
|| || || | |||| ||||| || ||||| | ||| || |||||
Sbjct 1095 AACTGCTTCA---ACAATA-ATCTTTTCGACAATTTCTGGATCTGGTCTATTATTTAAAT 1040
Query 42051 GTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGT 42110
| ||| | ||||| || ||||| || | ||| |||||||||| ||||||||| |
Sbjct 1039 GAGCAAATAATAAACAAGCAAAATCAGTATGTAAACCTTCATCTCTACAAATTAATTCAT 980
Query 42111 TGGAAAACGTGAGTCCGGGCATTAG-----------------GC--CA---CGCTTTT-- 42146
| ||||| || | || ||||| || || | |||||
Sbjct 979 TTGAAAAAGTTAAACCTGGCATNNNNNNNNNNNNNNNNNNNNGCATCAAACCTCTTTTCT 920
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| | ||| || ||||| |||||||||||| |||||| || ||||| || || |||||||
Sbjct 919 TTAACCAGAAAATAGATGCAAATGATCCACTAAAGAAAATACCTTCAACGGCAGCAAAGG 860
Query 42207 CAATAAGTCTCTCTCCATA----ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCG 42262
||| | ||| || |||| ||| || | ||| ||||| || ||||||||
Sbjct 859 CAACTAATCTTTCAGCATATAAGACCT-CAGTATCAGTAATCCATCTTAATGCCCAATCA 801
Query 42263 GCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTA 42322
|| || || | | ||| || || ||| || |||||||| | || | ||| ||
Sbjct 800 GCTTTTCTTCTAATACATGGAATATGTTCAATAGCATTAAATAAGTAATCAGCTTCCTTT 741
Query 42323 CTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATG 42382
||| |||| ||| ||||| || ||||| ||| ||||||||||||| ||||||||
Sbjct 740 GGATCCTTAATATAAGTATCAATTAAAAGGGAATAAGTTTCTGAATGAATATTTTCAATC 681
Query 42383 GCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGT 42442
|| || || || || || || | || || | || || ||||||| |||| |
Sbjct 680 ATAATTTGGAAACCATAAAATGATTTAGCTTCAGGAATTTGAACTTCTGCTGAAAAATTT 621
Query 42443 TCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 42502
||| ||||||||| || || || || ||| || ||||| || || ||||| |
Sbjct 620 TCAATTAAATTTTCATTAACAATACCATCAGATGCAGCAAAGAATGCTAATACTCGAGAA 561
Query 42503 ATAAAATATTTTTCGTCCGGTGTTAATTTAT---TCCAATCATTGATATCTTTAGATATA 42559
|| || ||| |||| || ||||||||| ||||||||| | ||||||| || |
Sbjct 560 ATGAAGTATCTTTCATCATCATTTAATTTATCTCTCCAATCATGTAAATCTTTACTTAAA 501
Query 42560 TCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCA 42619
|| | |||||| | |||||||||||||||||||| || || || | | ||| || |||
Sbjct 500 TCAATTTCTTCAGCAGTCCAAAATGATGCTTCTGCTTTCTTGTAAAATTGCCAAATTTCA 441
Query 42620 TGATATTGAATTGGGAAAATAACAAATCTATTTGGATTT 42658
|||||| |||||| || |||||||||||| ||||||
Sbjct 440 TGATATCTAATTGGAAACATAACAAATCTACGAGGATTT 402
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671117975222800
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