Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 120 3e-22
>seq2193
Length=52601
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
|| || |||| ||| | ||| |||||||| | |||||||| ||||| ||||||||||||
Sbjct 25283 TGACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGTAATCG 25224
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
| || || |||||| | ||| |||||||| | |||| |||||| ||||| |||
Sbjct 25223 GATAAAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGA 25164
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| || ||||| ||||| ||||| || | | || | ||||| | | |||
Sbjct 25163 GGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCA 25104
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||||| | || | ||||| || || || || || ||||| |||||||||
Sbjct 25103 ACTTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATA 25053
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032
||||||||||| | || ||||| ||||| |||||||| || || || || ||||
Sbjct 25037 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCGTCT 24978
Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092
|| | ||| |||||||| | |||| |||||| ||||| ||||| || ||||| |||||
Sbjct 24977 TCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTGTCT 24918
Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152
|||||| ||| | | || | ||||| | | ||| ||||| | ||| | |||
Sbjct 24917 TGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAACTTCTAAAGTGATGGTC 24858
Query 143153 TTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|| || || || || || ||||| |||||||||
Sbjct 24857 TTACCAGTTAAGGTCTTGACGAAAATTTGCATA 24825
Score = 105 bits (116), Expect = 7e-18
Identities = 156/221 (71%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 142973 AAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCT 143032
||||||||||| | || ||||| ||||| |||||||| ||| | || || ||||
Sbjct 24809 AAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGATAAAGTTCTACCGTCT 24750
Query 143033 TCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCG 143092
|| | ||| ||||||||| | |||| |||||| ||||| ||||| || ||||| || ||
Sbjct 24749 TCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGAATACCTTCCTTATCT 24690
Query 143093 GTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAGTCACCGTC 143152
||||| || | | || | ||||| | | ||| ||||| | || | |||
Sbjct 24689 TGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCTAAGGTAATGGTC 24630
Query 143153 TTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTTATGT 143193
|| || || || || || ||||| |||||||| | | ||||
Sbjct 24629 TTACCAGTTAAAGTCTTGACGAAGATTTGCATTGTTAATGT 24589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506998365669600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |