Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03] 2,530 sequences; 14,889,443 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq2193 123 2e-23 >seq2193 Length=52601 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||||||||||||| || ||||||| ||| || |||||||| || || ||| Sbjct 24825 ACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGA 24766 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 ||| | | || |||||||| || || ||||| ||||| ||||| || || |||| Sbjct 24765 TAAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGG 24706 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| |||||| ||||| ||||| | ||| ||| || | | || || Sbjct 24705 AATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAAC 24646 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | ||||| || ||||| ||||||||||| || || |||||||| Sbjct 24645 TTCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCAT 24598 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953 ||| |||||||||||||| || ||||||| ||| || |||||||| || || || Sbjct 25053 ACCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCAGA 24994 Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013 || | | || || ||||| || || || || ||||| ||||| || || |||| Sbjct 24993 CAAAGTTCTACCGTCTTCTAATTGCTTACCAGCGAAAATCAAACGTTGTTGATCTGGAGG 24934 Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073 | |||||| || ||| |||||| ||| || || | | || || | | || || Sbjct 24933 AATACCTTCCTTGTCTTGAATTTTAGATTTAACGTTATCGATTGTGTCAGAAGATTCAAC 24874 Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121 || | || || || ||||| ||||| ||||| || || |||||||| Sbjct 24873 TTCTAAAGTGATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 24826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354766660654440