Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Spathaspora_20gorwiae_20[genbank_20GCA_5F001655765.1_202016-06-03]
2,530 sequences; 14,889,443 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq2193 113 4e-20
seq2023 96.9 3e-15
>seq2193
Length=52601
Score = 113 bits (124), Expect = 4e-20
Identities = 166/235 (71%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 19974 ATCATTTTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGT 20033
|| ||| || |||| ||| ||||| || ||||||| |||||||| ||||| |||||||
Sbjct 25288 ATTATTGACCACCTCTTAATCTCAAGACTAAATGTAAAGTAGATTCCTTTTGGATGTTGT 25229
Query 20034 AATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGAT 20093
||||| | |||| || ||||||||||| || || || |||| | | |||||||
Sbjct 25228 AATCGGATAAAGTTCTACCGTCTTCCAATTGCTTACCAGCGAAAATCAAACGTTGTTGAT 25169
Query 20094 CGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAG 20153
| || | ||||| ||||| ||||| || || | | ||| || || ||
Sbjct 25168 CTGGAGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAG 25109
Query 20154 GTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| ||| | ||||||||| || || || || || ||||| |||||||||||
Sbjct 25108 ATTCAACTTCTAAGGTAATGGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCAT 25054
Score = 96.9 bits (106), Expect = 3e-15
Identities = 161/233 (69%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| || || || || ||||||| || ||||| ||||| |||||||| |||
Sbjct 24824 CCACCTCTCAATCTTAAAACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGAT 24765
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || ||||||||||| || || ||| |||| | | |||||||| ||
Sbjct 24764 AAAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGATCTGGAGGA 24705
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| || || ||||| || || | | ||| || || || ||| |
Sbjct 24704 ATACCTTCCTTATCTTGGATTTTAGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 24645
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAA 20214
|| | ||||||||| || || || || || ||||| || ||||||||| ||||
Sbjct 24644 TCTAAGGTAATGGTCTTACCAGTTAAAGTCTTGACGAAGATTTGCATTGTTAA 24592
>seq2023
Length=11923
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041
|| |||| ||| || || || || |||| |||||||| ||||| |||||||| ||
Sbjct 4140 CCACCTCTTAATCTTAAGACTAAGTGTAAGGTAGATTCCTTTTGGATGTTGTAGTCAGAT 4081
Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101
| |||| || |||||| ||||| || || ||| | || | || ||||| || ||
Sbjct 4080 AAAGTTCTACCATCTTCTAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGTGGA 4021
Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161
| ||||| ||||| || || ||| || | | ||| || || || ||| |
Sbjct 4020 ATACCTTCCTTGTCTTGGATCTTGGATTTGACATTGTCAATAGTGTCAGAAGATTCAACT 3961
Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTT 20212
|| | |||||| || || || || || || ||||| |||||||||||||||
Sbjct 3960 TCTAAGGTAATAGTCTTACCAGTTAAGGTCTTGACGAAAATTTGCATTTTT 3910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419574262290930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |